KEGG   Lotus japonicus: 130726337
Entry
130726337         CDS       T04348                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
lja  Lotus japonicus
Pathway
lja03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    130726337
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lja03021]
    130726337
Enzymes [BR:lja01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     130726337
Transcription machinery [BR:lja03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     130726337
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 CFAP77
Other DBs
NCBI-GeneID: 130726337
NCBI-ProteinID: XP_057433575
LinkDB
Position
1:complement(85736586..85742295)
AA seq 1208 aa
MGHIGSSKDGIGINLDDDIVDAMDVDVDFDLDDDDEDSSSNAEILKELGEDMVKHFCTKA
SRMFFDEHGLVSHQINSYNQFIAAGLQAAFDAFGDLNVTPSYDPSKKGDNEHFKYATVKF
GKVTLDRPKFWGGAANAQEFKMLPRHARLQRMTYAAKMKVTVEVQVFTPHKVRSDKFKTG
KEDYIDREIIKEDKREIIIGRLPVMVMSDLCWMKEAEKGDCDFDHGGYFLIKGAEKAFVA
QEQLFLKKLWVSNTPDWAIGYKSLNKRNRLILKLVGNSKFEEINNGEKVLSVYFLGVEVP
VWILFFSLGVSSDKEIIDLIDYGNEDTQIQNIFFGSIRDADEKCSGFRKGKNALHYMEEH
VKGIQYPPSESMEECLNLYLFPGSSGLNRKARFLAYMVKSLLLAYTGRRKCDNRDDFRNK
RFELAAELLERELKVHFAHARKRMSKALQRDLNGDRDVRPIEHYLDASIITNGLQRAFST
GAWTHPYKRLERTSGVVANLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVC
FLSTPDGENCGLVKNLSVTGLVSTNISESIFPQLLDCGMEELVDDTTTFLSKKDKVFLNG
DWVGVCPDPISFVAGLRSKRRRNELPHQVEIKRDQHQQEVRIYSDAGRILRPLLVVRNLL
KIKGSKSEPQTFQSLLDNGVIELVGPEEEEDCCTAWGVQSLFEKVGKSSVKYTHCELDKS
FLLGLGCSLIPFPNHDHARRVLYQSQKHSSQAIGYSTTNPDIRVDTLSHQLHYPQKPLFR
TMISDCLGKPQPLAQNQVLPKAEFYNGQNAIVAVNVHMGYNQEDSLVMNRASLQRGMFRS
EHVRSYKSEIENKDSAEKKRKPDDIVNFGKVESKIGRVDSLDDDGFPYVGANLQSGDIII
GRGAESGADHSIKLKHTERGYVQKVVLSSNDEGKNFATVSLRQVRSPVLGDKFSSMHGQK
GVLGFLESQENFHFTSQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAGALEKRFSRRG
LLRHATPFSTPSVEAIMDQLHRAGFSRSGTERVYDGRTGEMVRSLIFMGPTFYQRLHHMS
EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLYERLFTLSDSSQ
IHICSKCKNVANVILRPVAGGRKIRGPYCRFCESADDIVVANVPYGAKLLSQELFSMGIN
LKFETELC
NT seq 3627 nt   +upstreamnt  +downstreamnt
atgggtcacattggtagcagcaaggacggcattggcatcaacctcgacgacgacatcgtc
gacgccatggacgtcgacgtcgacttcgacctcgacgacgacgacgaagattcctcttcc
aacgccgagattctcaaggagctaggagaagacatggtcaagcatttctgcaccaaagct
tccagaatgttcttcgacgagcacggcctcgtcagccaccagataaactcctacaaccag
ttcatcgccgccggtcttcaagccgcgttcgatgccttcggcgacctcaatgtcacgccc
agctacgatccttccaagaagggtgacaacgagcatttcaaatacgccaccgtcaagttc
gggaaggtaacgcttgatcggccgaagttctggggcggcgcggcgaatgctcaggagttt
aagatgcttccgagacatgcacgccttcagaggatgacttatgctgctaaaatgaaagtc
actgttgaagttcaggtgtttacgccgcataaggttcggagtgataagtttaagactggg
aaagaagattacattgacagagagattataaaggaagataagagagagataattattggg
agattgcctgttatggttatgtctgatctgtgttggatgaaggaagctgaaaagggtgat
tgcgattttgatcacggaggctatttcttgattaagggtgctgagaaggcctttgttgca
caggaacaactatttcttaagaagctctgggtttcaaatactccagattgggcaattggg
tacaagtcgctgaacaagcgaaatcggttgattctgaaacttgttggcaattccaaattt
gaagaaataaacaatggggagaaggtcctgagtgtttatttcttgggtgtggaggttccc
gtatggatactgtttttcagtcttggcgtctcatcagacaaagagatcatagatctcatt
gattatgggaatgaagatacccaaattcagaatatcttctttggatccattcgtgatgcc
gatgagaaatgttctggttttcgtaaagggaagaacgcactgcactacatggaggaacat
gtgaaaggtatccagtatcctccttcagagtctatggaggagtgcctgaacttgtacctc
tttcctggcagcagcggtttgaataggaaggcacgcttccttgcgtatatggtgaagagt
ctgttgcttgcatatacgggccgcagaaaatgcgataacagggatgatttccgcaataag
aggtttgagttggctgctgagctgcttgagcgtgagctgaaagtgcactttgcacacgcc
cgaaagcgaatgtctaaggctttgcagagagatctgaatggagatcgtgatgtgcgccca
attgagcactatctcgatgcttcaattattaccaatggtctccaaagggccttttccact
ggagcgtggactcatccttataaaaggttagaaaggacctctggtgttgttgcaaatctt
gggcgaactaatccattacagaccatggctgaattaagaagaacaaggcaacaagttcag
tacactggaaaggttggggatgctagatacccgcatccttctcactggggcaaggtctgt
ttcctctctaccccggatggtgaaaattgtggactagtaaaaaatttgtctgtcacagga
ctagtgagtacaaacataagtgaatctatatttcctcagttgcttgattgtggaatggaa
gagcttgttgatgatactaccacttttctgagcaaaaaagacaaagtcttcctaaatggg
gattgggttggagtttgtccagatccaatttcatttgtggcaggtctacggagtaaaagg
cgtagaaatgaattgccacaccaggtggaaattaaaagagatcaacatcaacaagaagtg
cgcatatactctgatgctggaaggattctacgtcctcttttggtagttcgtaatttgctc
aagattaaaggatctaagtcggaacctcaaactttccagtccctattggataatggtgtg
attgaactggtaggaccagaagaagaagaggactgctgcactgcttggggtgttcagagt
ttatttgaaaaagtgggaaaatcctctgtaaagtacacacattgcgaacttgacaagtca
ttcttattgggtttaggctgttcacttattccatttccaaatcatgaccatgcaaggagg
gtactctaccagtctcaaaaacactcttcacaggctattggctattccacaacaaaccct
gatattagagttgatactttatctcatcaattgcattatccccaaaagccacttttccga
acaatgatatctgactgcctgggaaaaccacagccactagctcaaaatcaagttcttcca
aaggctgagttctataatgggcagaatgcaattgttgctgtcaatgtacatatgggatac
aatcaggaagattctctggtgatgaatcgtgcttctttgcagcgtggtatgtttagatct
gagcacgtacggagttacaaatctgagattgaaaataaggactctgcagagaagaaacgg
aaaccagatgatattgtcaattttgggaaggttgaaagtaaaattggccgagtcgatagc
cttgatgatgatggctttccatatgttggtgcaaatttgcaaagtggggatatcattatt
gggcggggtgctgagtcaggagcagaccatagtattaagttaaaacacactgaaaggggt
tatgttcaaaaggttgtcttatcttccaatgacgagggaaagaattttgccacagtttca
ttaagacaggttcgtagtccagttcttggagacaagttctccagcatgcatggtcaaaag
ggtgtcttaggatttctggagtctcaggaaaattttcatttcacaagccaaggcattgtt
cctgatattgtcattaatccgcatgcatttccctcacgacaaactcctgggcaactcctt
gaagctgctttaggaaaggggattgctggtgctttagaaaagaggttttctcgtcgtgga
ttattgagacatgctacccctttctccactccctctgtcgaagccattatggaccagctt
cacagagctgggttttcaaggtcgggaactgagagggtatatgatgggaggactggtgag
atggtgcgttcgctcatatttatgggccccaccttctatcagagactacaccacatgtct
gaggacaaagtaaaattcaggaacactggtccggttcacccgctaacccgacagcctgtt
gctgaccggaagcgatttggaggtatcaagtttggtgaaatggagcgtgattgcctcata
gcacatggcgcatcagcaaacctgtatgaacgcctcttcactctgagtgactcgtcccag
atacacatttgcagtaaatgcaaaaatgttgcaaatgtgatcttaaggccggtggctggt
ggccgtaaaatacgaggtccctattgccgcttctgtgaatctgctgatgacattgtggta
gccaatgtcccttatggagctaagttattgagccaagagctttttagcatgggcattaat
ctcaaatttgaaactgaactttgctag

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