Lotus japonicus: 130726558
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Entry
130726558 CDS
T04348
Name
(RefSeq) transcription elongation factor SPT4 homolog 1
KO
K15171
transcription elongation factor SPT4
Organism
lja
Lotus japonicus
Pathway
lja03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130726558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lja03021
]
130726558
03019 Messenger RNA biogenesis [BR:
lja03019
]
130726558
Transcription machinery [BR:
lja03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
130726558
RNA polymerase I system
130726558
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
130726558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
VWC2L_2nd
HIPIP
Motif
Other DBs
NCBI-GeneID:
130726558
NCBI-ProteinID:
XP_057433825
UniProt:
I3SN22
LinkDB
All DBs
Position
6:complement(59171069..59173580)
Genome browser
AA seq
115 aa
AA seq
DB search
MSREPAQIPTSFGHELRACLRCRLVKTYDQFRDSGCENCQFFKMEEDHERIADCTTPNFN
GIISVMDPSRSWAARWLRIGKFAPGVYTLAVSEALPEEMQAICEEERVQYAPPKR
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagggaacctgctcaaattcccacaagctttggccacgagttgagggcttgtctc
cgttgccgcctcgtcaaaacctacgatcagtttagagattcaggttgtgagaattgtcag
ttctttaagatggaagaagatcatgagcggattgcggattgcactacccccaatttcaat
gggattatttcagtcatggatcctagtcggagctgggctgcgcgttggttgcgaattgga
aaatttgctcctggtgtttacactctggctgtctcagaggctctcccggaagagatgcag
gctatatgcgaagaggagcgtgtgcaatatgcccctcccaaacgttag
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integrated database retrieval system
