Lotus japonicus: 130726643
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Entry
130726643 CDS
T04348
Name
(RefSeq) ATP-dependent DNA helicase PIF1-like
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lja03032
]
130726643
03029 Mitochondrial biogenesis [BR:
lja03029
]
130726643
Enzymes [BR:
lja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
130726643
DNA replication proteins [BR:
lja03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
130726643
Mitochondrial biogenesis [BR:
lja03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
130726643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
Pif1_2B_dom
AAA_22
DEAD
Herpes_Helicase
AAA_16
PhoH
AAA_7
AAA_24
UvrD-helicase
AAA_14
SLFN-g3_helicase
ResIII
ATPase_2
NPHP3_N
Viral_helicase1
NACHT
ATP-synt_ab
FtsK_SpoIIIE
ATPase
Mg_chelatase
AAA_5
nSTAND3
AAA_11
AAA_25
NB-ARC
SH3_13
T2SSE
DnaB_C
AAA_29
Sigma54_activat
AAA
NTPase_1
ABC_tran
Helicase_RecD
TsaE
Motif
Other DBs
NCBI-GeneID:
130726643
NCBI-ProteinID:
XP_057433928
LinkDB
All DBs
Position
6:45703669..45706107
Genome browser
AA seq
492 aa
AA seq
DB search
MRFCTNVSVAAAYKRLFSTKVSEQCRTPIARIEWGDEQNRVLAAISQGKSVFITGSAGTG
KTFLLAEVIKSLSKLHTPSTVSVTASTGIAACALKGQTLHSFAGIGICSFDDPKRLLDKV
SKIKSAVTRWRKVKALVVDEISMISAKLFDHLDYIARKIKGVDKPWGGIQIVVSGDFFQL
PPIADDYDEAMYAFDADCWNDSFDLQVELTRVFRQSDAGLARLLEGIRRGESEQHDLEFL
EQFCSKTKCDSSVVQIFPLNEDVKRVNEARLKSLKKDLVVYKAVDFGKGHWKWMLNSGIA
PKEISLCEGARVMLIKNINTESGLVNGATGTVLRFSHSSAKDLGRICPDQVMPVVQFDAG
QCMPVTPEKWEVLDGENVVACRKQVPLILAWAMSIHKCQGMTLERLHTDLSRAFGCGMVY
VALSRLRSLEGLHLSSFDRSKIKANQKVSRFYKSLASSEQKKEVMVVGSNKIIDHPSGDT
EIIDFAESENAV
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagattctgtaccaatgtttctgttgcagcagcatacaagagattattcagtaccaag
gtttctgaacaatgtagaaccccaattgctaggattgaatggggagatgagcaaaatcgc
gttctggccgcgatatctcagggaaaatctgtgttcatcactggctctgctgggactgga
aagacatttttgcttgcagaagttattaaatcgctgagcaaattgcataccccgtctacg
gtttctgtcacggcttcaactgggattgcggcgtgtgctttaaaggggcaaacattacat
tcgtttgctgggattggaatatgcagttttgatgatcctaagcgcttgttagataaggtt
tcgaagattaaaagcgccgtcacgagatggagaaaggttaaggctttggttgttgatgaa
attagtatgataagtgcaaaattgtttgaccatcttgattatattgcaagaaagataaag
ggtgtggataaaccctggggtgggattcagattgttgtaagtggtgattttttccaattg
ccaccaattgctgatgactatgatgaggctatgtatgcatttgatgctgattgttggaat
gacagctttgatttgcaggtggagctcacaagggtgttcaggcaatcagatgctgggctt
gccaggttgcttgagggtatcaggagaggggagagtgaacaacatgatttggagttccta
gagcaattttgctcaaagactaagtgtgattcttctgttgtgcagatcttccctctgaat
gaagatgttaagagagtgaatgaagcgaggctgaaaagtttgaaaaaggatcttgttgtt
tataaagctgttgattttggtaaggggcattggaagtggatgctcaatagtggcattgca
cctaaagaaatttctctttgtgaaggtgcaagagttatgttgattaagaatataaatact
gagagtggattggtaaatggagctactggtacagtgttgagattttcacattcatctgct
aaggatcttggtcgcatatgccctgatcaagtgatgccagtagtgcaatttgatgcagga
caatgtatgccagtgacaccggaaaaatgggaagttttggatggagaaaacgttgttgct
tgcaggaagcaggttcctcttatactggcatgggctatgagcattcacaagtgccaaggg
atgactcttgagaggcttcacacagatctatccagagcatttggctgtggcatggtgtat
gttgcactttctcgccttagaagcttggagggacttcatttatcttccttcgatcgatcg
aagatcaaagcgaaccaaaaggtttcaaggttctacaagagtttggcttcttctgaacaa
aaaaaggaggttatggtggttggtagcaacaagatcatagatcaccccagtggtgatacg
gaaataattgattttgctgagagtgaaaatgcagtatag
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