Lotus japonicus: 130727358
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Entry
130727358 CDS
T04348
Name
(RefSeq) cysteine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
lja
Lotus japonicus
Pathway
lja00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130727358
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lja01007
]
130727358
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lja03016
]
130727358
Enzymes [BR:
lja01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
130727358
Amino acid related enzymes [BR:
lja01007
]
Aminoacyl-tRNA synthetase
Class I (G)
130727358
Transfer RNA biogenesis [BR:
lja03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
130727358
Prokaryotic type
130727358
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1f
tRNA-synt_1
CysS_C
DALR_2
LMP
Motif
Other DBs
NCBI-GeneID:
130727358
NCBI-ProteinID:
XP_057434446
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Position
1:complement(86451239..86456322)
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AA seq
558 aa
AA seq
DB search
MGTLSLLKCYRPFSSMVLPHSAAIFRRNNLPSFRAVASSPPLTAEKNFDGESFHSKPEVW
LHNTMSKRKELFKPKVESKVGMYVCGVTAYDFSHIGHARVYVNFDLLYRYFKHLGFEVCY
VRNFTDVDDKIIARSKELGEDPISLSRRFCEEFCQDMETLNCLPPSEQPKVSDHMPQIID
MIEKILNNGYAYIIDGDVYFDVKKFPEYGKLSSRNLEDNRAGERVAVDTRKKNPADFALW
KSAKPGEPFWETPWGPGRPGWHIECSAMSATYLGYSFDIHGGGIDLVFPHHENEIAQSCA
ACKKSDISLWMHNGFVTIDSVKMSKSLGNFFTIRQVVDVYHPLALRYFLMGAHYRSPINY
SHVQLESASDRVYYIYETLHECERFLNQQDRTVRKDNIPPDTLSIINKLHEVFLTSMSDD
LHTPVVLAGLSDPLKSINDLLHTRKGKKQQFRIESLAALEKSIEDVLTVLGLKPSSYSEI
LEQLKEKALKRANITEDEVLKKIEGRDAARLQKEYAKSDAIRKDLANVGIALMDSPNGTT
WRPSIPVPLQELLLAKSE
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgggaactctatctcttctgaaatgctacagacccttctcctctatggttctccctcac
tcagcagccatcttcaggcgcaacaacttaccttcttttcgcgccgtcgcatcctccccg
ccgttgacggcggagaagaatttcgacggcgagagtttccattcgaagccggaggtgtgg
ctgcacaacaccatgagtaagaggaaggagcttttcaaacccaaagtggaatccaaagtc
ggaatgtatgtctgtggagtcaccgcttatgatttcagtcatattggtcatgctcgtgtt
tatgtcaatttcgatcttctttacagatattttaagcatttgggatttgaagtgtgttat
gttcgcaattttactgatgtagatgacaagataattgctagatcaaaggagttaggagaa
gacccaatcagtttgagcaggcgtttttgtgaagagttctgtcaagacatggagactctt
aattgtttgcctccttctgagcaaccaaaagtctcagaccacatgccccaaatcattgat
atgattgagaagattcttaataatgggtatgcctacatcattgatggggatgtatacttt
gatgtaaaaaaattcccagaatatggaaaattatccagtcgaaatctagaagataatcga
gctggtgagagggttgctgttgacacaaggaagaaaaatcctgctgattttgctctttgg
aagtctgcaaagccaggagagccattttgggagactccctggggtcctggaagacctggg
tggcatattgaatgtagtgctatgagtgcaacttatcttggatactcttttgacatccac
ggtggagggattgaccttgtgtttcctcaccatgaaaatgaaattgctcagagttgtgct
gcttgtaagaaaagtgatataagcctatggatgcacaatggttttgtcaccattgactct
gtgaagatgtctaaatccctgggaaattttttcacaatacggcaggttgtagatgtttac
catcctttggctttgagatattttttgatgggcgcccattatagatctcctattaactac
tctcatgtccagcttgaaagtgcttcagaccgtgtttattatatatacgagacattacat
gaatgtgaaaggttcctcaatcagcaagatcggacagttaggaaggataacatcccacca
gatactttgagtattattaataaattgcatgaagtttttttgacctcaatgtctgatgat
cttcacactccggttgtattggcgggactgtctgacccattaaaatcaattaatgacttg
ctgcatactcgtaaggggaaaaaacaacaatttcgaatagaatcgcttgcagctttggag
aagagcatcgaggatgtccttactgttttagggcttaagccttcaagctattctgagata
ttggagcaacttaaggaaaaagctttaaagcgcgcaaacataaccgaagatgaagtgttg
aagaaaattgaaggacgggatgctgctagattgcaaaaggagtatgcaaaatcagatgca
ataaggaaggatttggctaatgttggcattgctcttatggacagtccaaatggcacaact
tggaggccttccattcctgttccacttcaagagttgctcttagccaaatcagaataa
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