Lotus japonicus: 130727410
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Entry
130727410 CDS
T04348
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic isoform X1
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
lja
Lotus japonicus
Pathway
lja00730
Thiamine metabolism
lja00900
Terpenoid backbone biosynthesis
lja01100
Metabolic pathways
lja01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
130727410
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
130727410
Enzymes [BR:
lja01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
130727410
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Transketolase_C_1
Motif
Other DBs
NCBI-GeneID:
130727410
NCBI-ProteinID:
XP_057434518
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Position
1:complement(87049801..87056664)
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AA seq
718 aa
AA seq
DB search
MMGAVPARYPLGIPLHSHGGALSRRVDFTTSHFPVHLDLSRIALCPRSASEEFIDRVCAR
SDIDDFDWEWDEVPTPILDTVENPLCLKNLSLKELKQLAAEIRMDLSSLMSDTQISPKAS
MAVAELTVAMHHVFHAPVDKILWDVGDQTYAHKILTGRRSLMKTMRQKNGLSGFTSRSES
EYDAFGSGHGCNSISAGLGMAVARDIKGRRERIVAVISNWTTMAGQVYEAMSNAGCLDSN
LVVILNDSRHSLLPKIDEGPTTSVSALSSTLSRLQSSKSFRRFREAAKGVTKRIGRGMHE
WAAKVDEYARGMMGPLGATLFEELGLYYIGPVDGHNMEDLVCVLQEVASLDSMGPVLVHV
ITDKNQGVENNQKSDITDRHQNDSVETDFLNHDVRPQAYGDCFVETLVAEAEKDKDIVVV
HAGMLMEPSLELFREKFPDRFFDVGMAEQHAVTFASGLSCGGLKPFCIIPSSFLQRAYDQ
VVHDVDQQKIPVRFVITSAGVVGSDGPLHCGAFDITFMSCLPNMIVMAPSDEVELMHMVA
TAAQINDRPVCFRYPRGVLVGEDYTIPNGIPIKIGKGRILAEGKDVALLGYGSMVQNCLK
AHSLLAKLGVEVTVADARFCKPLDIKLLRHLCKHHSFLITVEEGSVGGFGSHVAQFIALD
GLLDRGIKWRPIVLPDRYIEHASPNEQLDQAGLTGHHIAATALSLLGRTREALQFMCF
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgatgggtgctgttcctgctagataccctttgggaatccctttgcactctcacggtggt
gctctttctcgcagagtcgacttcaccacctcacacttccctgttcatcttgacctttca
agaattgccttgtgcccccgttctgcttctgaggaattcattgatagagtatgtgcacgg
tctgatattgatgattttgactgggaatgggacgaagttccgacacctattcttgacacg
gttgaaaatcctctttgcttgaagaacctttctcttaaggaactgaaacaactagctgct
gaaatccgtatggacctatcttctcttatgtcagatacacaaatatcaccgaaagcaagt
atggcagtagcggagctgacggttgcaatgcatcatgtttttcatgctccagtagacaag
atattgtgggatgttggggatcaaacatatgcacataagattcttacaggaaggcgatca
cttatgaagacaatgagacaaaagaatggtctttctggttttacatcccgatctgagagt
gaatatgatgcatttggttcaggtcatgggtgcaacagtatttctgctggacttggcatg
gcagtggcacgggatattaaagggaggcgagagcgaatagttgcagttatcagcaattgg
actacgatggctggtcaggtgtatgaggcaatgagcaatgcaggatgtttggactcaaat
ctggtggtgattttgaatgacagccgtcactctttactccccaaaatcgatgagggccca
acaacttctgtcagtgccctgtctagtaccctaagcaggctccagtccagtaaatctttc
cgaagatttagagaagctgctaagggtgttactaaacgaattggtaggggtatgcatgaa
tgggcagctaaagttgatgaatatgcccgtggtatgatgggtccactaggtgctactctt
tttgaagagcttggattgtactacattggaccagtggatggacacaatatggaagatcta
gtatgtgtgttgcaagaagtagcatccctggattcaatgggtcctgtgttagttcatgtg
ataaccgataaaaatcagggagtagaaaacaatcagaaaagtgatataacggacaggcat
cagaatgattctgttgaaactgattttttaaaccatgatgttcgccctcaagcgtatggt
gattgctttgtggagactttggttgcagaagcagagaaagacaaagatattgtggttgtt
catgcaggaatgttgatggagccatcacttgaactgtttcgagaaaaatttccagataga
ttttttgatgtgggaatggctgagcaacatgctgtgacatttgcttctggtttgtcatgt
ggtggattgaagccattttgcattataccttcttccttcctacaaagagcctatgaccag
gtggttcatgatgttgatcaacagaaaattccagtgcgttttgtcattacaagtgcggga
gtggttggttctgatggtcccctccattgtggggcatttgacataaccttcatgtcatgc
ttgccaaacatgatagtcatggcgccatctgatgaggttgaactcatgcacatggtggct
actgctgctcaaatcaatgatcggcccgtatgctttcggtatcctaggggtgtcttggtt
ggggaagactacactatacccaatggaatccccattaagattggaaaaggaagaattctt
gctgaaggtaaagatgttgctttactgggatatggatcaatggttcagaactgtctgaag
gctcactcacttcttgcaaagcttggtgttgaggtgactgttgctgacgcaaggttctgc
aagccccttgacatcaagcttctgaggcatctttgtaaacaccattcttttctaattact
gttgaggaaggttccgtagggggatttggttcccatgttgctcagtttattgcactggat
ggactgcttgatagaggaatcaagtggcgaccaattgtcttaccagacagatacattgag
catgcatctccaaatgagcagcttgaccaagcagggttgactggacatcacattgctgca
accgcgttgagtttgctcggccgtacccgtgaagctctccagtttatgtgcttctga
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