Lotus japonicus: 130727437
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Entry
130727437 CDS
T04348
Name
(RefSeq) syntaxin-32-like
KO
K08490
syntaxin 5
Organism
lja
Lotus japonicus
Pathway
lja04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
130727437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130727437
Membrane trafficking [BR:
lja04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
130727437
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
DUF7310
Prominin
Motif
Other DBs
NCBI-GeneID:
130727437
NCBI-ProteinID:
XP_057434548
LinkDB
All DBs
Position
1:complement(87353336..87357652)
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AA seq
344 aa
AA seq
DB search
MHVKSAQSSYRDRTHEFHSITERLKKSGSGPNGPATTTTTSSRSEEPRSAIAMQSEFNKR
ASKIGYGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTSVIKQDITALNSAVVDLQLLS
NSRNESGNASADTTSHSTTVVDDLKTRLMGATKEFKDVLTMRTENMKVHESRRQLFSASA
SKDSANPFVRQRPLATRSAASSSDAPAPPWASGSQSSSQLFPKKQVDGESQPLLQQQQQQ
QQQQQQIVPLQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEVAIRIDENMDDT
LANVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcaaatcggcgcagtcatcgtatcgggatcggacgcacgaattccacagcatc
acagagaggttgaagaaatcaggatctggacccaatggacctgccaccaccaccaccacc
tcatccagatcggaggaaccccgttctgccattgctatgcaatcagaattcaacaaaaga
gcctccaaaatcggttacggcattcaccaaacctctcagaagctcgccaagctcgcaaaa
ttggcgaaaaggacttcggttttcgatgaccctaccatggaaatccaagagcttactagt
gttattaagcaggatattactgcgctaaactccgcggttgttgatcttcagttactcagc
aattctaggaatgagagtggaaatgcttctgccgacacgactagtcattccaccacggtt
gtagatgacctcaagacgcggttgatgggtgccacgaaggagtttaaagatgttctcacc
atgagaactgagaacatgaaagtacacgagagtaggagacaattgttttcggcctctgcc
tcgaaagattctgctaacccttttgtccgtcagcgacctttagctacgaggtccgctgct
agttcttctgatgcccctgcacctccatgggctagtggttcgcaatcttcatcccagttg
tttcctaagaagcaagtggatggggagagtcaaccattgttgcaacagcagcaacaacaa
cagcaacagcagcaacagatagttcctttacaagacagttacatgcaaagcagagcagaa
gcacttcagaatgttgagtccactattcatgagctcagcaacatttttaatcaactagca
acacttgtttcccaacaaggagaggttgccatcaggattgatgaaaacatggatgataca
ttggcaaacgtggagggggcgcaaggtgctttgttgaagtatctgaacagcatatcttct
aataggtggctcatgatcaagattttctttgtattaatatttttccttatggttttctta
ttttttgtggcatag
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