Lotus japonicus: 130727457
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Entry
130727457 CDS
T04348
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1-like
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lja01001
]
130727457
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lja04121
]
130727457
Enzymes [BR:
lja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
130727457
Protein kinases [BR:
lja01001
]
Serine/threonine kinases: Other
Other
130727457
Ubiquitin system [BR:
lja04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
130727457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
LisH
WD40_MABP1-WDR62_2nd
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_EML_2
WD40
EIF3I
Motif
Other DBs
NCBI-GeneID:
130727457
NCBI-ProteinID:
XP_057434580
LinkDB
All DBs
Position
1:complement(87539607..87547989)
Genome browser
AA seq
1936 aa
AA seq
DB search
MDDQNQPPRDEDDDDSKKEEEELLIDKVNKLMDKITSNPDNPKPSVLHALASILQTHESR
YMEESGYSSSSNARAAHLIGRLGSVIRENDDFFELVSAKFLLETRYSTAVQAAAARLILC
CSLTWIYPHVFEESVVENIKNWVMDDNLRFSGEEQNHGGREASDSEMLKTYSTGLLAVCL
VGDVKVVEDVLTCGLSAKLMRYLRLRVLGETSGSQRDTSHLSESRHSSGNTSVRGKDDGR
SRIRQLLDSSHLDDTRVNDERSLDDPTLERGQDRNTSGQTCQEDAWIDDEPTDRLGEGAD
ICEVDSDGEDRWHCRDIRDGKTKHGEHEDNARDDSSRRRANRGWGRSRGKGRVNEGTVES
EPVLSPPGPGSRLGQGRSVRDRSIVRNADVRRVPDSKNFARITSEVSVSERMDNDDCFQG
CHIGSKDISDLVRKAVQAAETEARSANAPEEAVKVAGDAAADLVKTAATEEYNSTKDEEL
AVLAASRAASTVIDAASAVEVSRNSVCVNNEAENVSGRETESSEDVEDYFIPDIQSLANL
REKYCIQCLELLGQYLEVLGPVLHEKGVDVCLALLQQNSKHQEASKVALLLPDVMKLICA
LSAHKKFAALFVDRGGMQKLLAVPRLAQTFFGLSSCLVTIGSLQGIMERVCALPSDVVYH
VVELALQLLECNQDQARENAAQFFAVAFVFRAVIDAFDSQDGLQKLLGLLNDVASVRSGV
TSGALGLSNLGSLRNDRSSAEALTSSEKVVAYEACVALRKYFRAHLLLLVDSIRPNKSNR
SAARNVPSIRAAYKPLLISNEAIDAVFQQLQKDRKLGPAFVRTYWPAVEKFVSYNGHITM
LELCQAPPQERYLHDLVQYALGILHIVTLVPSSRKMIVNTTLSNNRAGIAVILDAANIAS
SHVDPEIIQPALNVLVNLVCPPPSISNKQSAVMQGQQFVSSQTSNGPPSETRDRNAERNT
VTVDRAVHVTSQIDPRERNGESSAIDRSSAAALSAQCVNNTPQTPGPAASSGLVGDRRIS
LGAGAGSVGLAAQLEQAYRQAREAVRSNNGIKVLLHLLQPRIYSSPASLDCLRALACRVL
LGLARDDTIAHILTKLQVGKKLSELIRDSGSPTLGNEQGRWQAELSQAAIELIGIVTNLG
CASTLAATDAATPTLRRIERAAIAAATPITYHSRELLLLVHEHLQAFGLAQTASTLLKEA
QLTPLPSLISPTLAQQPTAQEASSTPIQWPSGRTPSGFLTRVPGFLTHKLKFNSIDEYSS
LKSDAISAKKKSLTFSSSFGSHSKHQPVDSQHTSVRKLLSTGREPSDTSIVETPSESAVK
HNIDAGSQYKTPITLPSKRKLSDLKDIPMFSSSVKRLNVGDQGLRSPVCAGAVRKSSQQT
NTVGTPTCILRSQQGRCTSDCADESQYSISNPGQGSSSQILNDLQANNSERVTLDSLVVQ
YLKHQHRQCPAPITTLPPLSLLHPHVCPEPKRSLDAPSNVSARLGTREFKFRYGGVHGNR
RDRQFVFSRFRPWRTCRDDAGALLTCITFVGDSSHIAAGSHNGELKFFDSNNNNVVESFT
AHQSPLTLVQSFVSGETQTLLSSTSQDVKLWDATSILAGPSHSFEGCKAARFSNSGNVFA
ALSSDTARREILLYDIQTCHIESSLVDTYPSSTGKGNVYPLIHFSPSDSMLLWNGVLWDR
RVSGPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTAITFNARGD
VMYAILRRNLEDVMSAVHARRVKHPLFAAFRTVDAINYSDIATTPVDRCVLDFATEPTDS
FVGLITMDDQNEMYASARVYEIGRCRPTDDDSDPDDAESEDEEDDDDDDDGDDEDPLLGP
GLGRESDSDDMSNDDYDSASDIDDEDADFILDDLDFDGGTGLLEIVGDRDEDDDDSQELE
SASSDDEDFDDNDFGY
NT seq
5811 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcagaaccaaccgccacgtgatgaagacgacgatgattccaagaaggaagaa
gaggagttgttgatcgacaaggttaacaagctcatggacaagatcacctccaaccctgac
aaccctaaaccctccgttctccacgcccttgcctccattctccaaactcatgagtccagg
tacatggaagagagtggttattcttcctccagtaatgcccgcgccgcgcatctcattggc
cgcctcgggagtgtaatcagggaaaatgatgatttctttgagttggtatctgcaaagttt
ctgttagagactagatactccactgcggttcaagcagccgccgccaggcttatcctctgc
tgttccctgacttggatttatcctcatgttttcgaagaatcggttgtggaaaacataaaa
aattgggtgatggatgacaatcttagattttctggtgaagagcaaaatcatgggggaagg
gaggcctcagattctgaaatgttgaaaacctattccaccggtctccttgcggtgtgtttg
gtcggagatgttaaagtagtggaagatgtattgacatgtggcttgtcggctaagcttatg
cgttatcttcgcttacgtgtgctgggtgagacaagtggcagccaaagagatactagtcat
ttatcagaaagtaggcattcatctgggaatacttcagtaagaggtaaagatgatggtcgc
agtaggattcgccagctccttgattcgagtcatttggatgatacaagggtgaatgatgag
agatcattagatgacccaacacttgaaaggggtcaagatagaaacacaagtggacaaact
tgtcaagaagatgcttggatagacgatgaaccaactgataggctcggtgagggcgctgat
atctgtgaggtagattctgatggggaggatagatggcactgtagagatatacgtgatgga
aagacaaaacatggtgagcatgaagacaatgctagagatgactcttccaggcggcgtgca
aaccgtgggtggggaagatcccgagggaaaggaagggtcaatgaagggacggtagaaagt
gaaccagttttgtcacctcctggtcctggtagtcgattagggcaggggcgcagtgttaga
gataggagcatagtaaggaatgctgatgttcggagggttcctgattctaagaattttgcc
aggatcacttctgaggtgtcagtttccgaaagaatggataatgatgactgtttccaaggg
tgccatattggaagcaaagatatttctgatcttgtgcggaaagccgtccaagctgctgaa
actgaagccagatccgccaatgcacctgaagaagctgttaaagtagctggtgatgctgct
gctgaccttgttaaaactgcagctacagaggaatataactccaccaaagatgaggaatta
gctgttttggctgcttccagagctgcatcaactgttattgatgctgcctctgcagtcgaa
gtttctaggaactctgtctgcgtcaataatgaggcagaaaatgtgagtggcagagaaaca
gaatctagtgaggacgttgaagattacttcatcccagacattcaatcacttgcaaatttg
agggaaaaatattgcatacagtgtcttgagttacttgggcaatatttagaagttcttggc
cctgtgttgcatgagaagggggttgatgtgtgtcttgcactgctgcagcagaattctaag
catcaggaggcatccaaggttgcgttactgttgcctgatgtcatgaagctaatctgtgct
ttgtcagcacataagaaatttgctgcattatttgtggaccgtgggggaatgcaaaagctg
ctagctgtccctagattggctcaaactttctttggcctttcttcttgtctagtgactatt
ggttctcttcaggggataatggaacgggtttgtgcgcttccatctgatgttgtttatcat
gtggttgagttggctctccaactcctcgagtgcaatcaagatcaagcccgagagaatgcc
gcacaattcttcgctgttgcatttgttttcagagcagttatcgatgcttttgattctcag
gatggcttacagaagttgctgggccttctaaatgatgttgcttcagtaagatcaggagtg
acttctggagccttgggtttatctaacttaggatcacttcgaaatgatcgatcatctgca
gaagcgctgacatcatctgagaaggtcgtagcctatgaagcttgtgtcgctttgcggaaa
tattttagagcacatctccttttattagtggattcaattcgtcccaacaaaagcaatcgt
agtgctgctagaaatgttccaagtataagggcagcttacaaaccactcctcattagcaat
gaggcaatcgatgcagtattccaacaattacagaaagataggaagctaggtccagcattt
gtgagaacatattggccagcagttgagaagttcgtgtcatataatggacatattaccatg
ttggaattgtgtcaggccccacctcaagagcgatatctgcatgatttggttcagtatgca
ttgggtattctgcacattgttacattggtacctagcagtcgtaagatgattgtaaataca
acattaagcaataaccgtgctggcatagctgtaattttggatgcagcaaatattgctagt
agtcacgtggaccctgagataattcaaccggcattaaatgttttagtcaatcttgtttgc
ccacctccttcaatcagcaataaacaatctgcagttatgcaaggtcagcagtttgtgtct
tcccaaacctcaaatggtcctccctcggagactcgagatagaaatgctgaacgtaatacg
gttacggttgatcgagctgttcatgtcaccagccagattgatcctagggaaaggaatggg
gagtccagtgctatagaccgaagcagtgctgcagcacttagtgcacaatgtgttaataat
actccacaaacgcctggtcctgctgcaagttcaggtttggttggcgaccgaagaatatct
ctgggtgcaggggcgggttctgtcggccttgctgcgcagctggaacaagcatatcgtcaa
gcaagagaggctgtccgctctaataatggcataaaggttcttctgcacctcctccaacca
cgcatatattcatctcctgcttctctggactgccttcgtgctctagcttgtcgtgtcctg
cttggattagccagagatgatactattgcacacatattgacaaagcttcaggttgggaaa
aagctgtcagaactaattcgggattcaggcagcccgacacttggaaatgagcagggtagg
tggcaagctgaactttcccaggctgcaattgagctaattgggattgtgactaatttaggg
tgtgcaagtacattagctgctactgatgcagctactcctacgttgaggcgcatagaaaga
gcagctatagctgctgctactcctattacataccattcaagggaactcttgctcctggtt
catgaacacctacaggcatttggattagcacaaactgcttctacattgcttaaagaggct
cagttgactcctttgccatcattgatttctcctactcttgcgcagcagcccactgcacag
gaagcttcttcaacaccaattcagtggccctccggtcgtactccttctggatttctcact
cgtgttcctggatttctcactcacaaattaaagtttaattcaatagatgagtattccagc
ttgaaaagtgatgctatctctgcaaagaaaaaatcactgactttctcatcatcttttggt
tcccattcaaaacaccaacctgttgactctcagcacacatcggtcagaaaattgttaagt
actgggagagagccttcagatactagtatagtagagactccgtctgaatctgcggtgaaa
cataacattgatgctggatctcagtacaagactccaatcaccttgccatcaaaacgaaag
ttatctgatttaaaggatataccaatgttttcatcatctgtaaagcggctaaatgttggg
gatcaaggacttcgctctcctgtttgtgcgggtgctgttcgtaaaagtagtcagcagact
aatactgttgggacacccacttgtatcctgagaagtcaacaaggccgttgtacgtctgac
tgtgcggatgaaagtcagtacagtatctcaaatccaggtcaggggtcgtcctcccaaata
ttaaatgatcttcaggccaacaactctgagcgtgtaacattggattctctagtggttcag
tatctgaagcatcagcatcgccaatgccccgctcccattaccacacttcctccactgtct
cttctacacccacatgtttgtccggaacctaagcgaagccttgatgccccttctaatgtg
tcagctcgacttggtacccgtgaatttaagtttaggtatggtggagtgcatgggaatcgc
agggatcgtcaatttgttttcagccggtttagaccatggcgcacttgtcgggacgatgct
ggtgccttattaacgtgcatcacatttgttggagactcttctcatattgctgctgggagc
cataatggagagctcaaattttttgactccaataacaacaatgtcgtggaaagctttaca
gcccaccagtctcctttgacccttgttcagtcgttcgtttctggtgagacccagacattg
ctttcctcaacctctcaagatgttaagctgtgggatgcaacatcaattttagctggtcct
agtcattcatttgaaggttgcaaggctgccaggtttagcaattctggtaatgtttttgca
gccttgtcatcagatactgcacgacgggaaatcctcttgtatgatatccaaacatgtcac
atagagtcgagtttagtagatacatatccatcttccacagggaagggtaatgtttatcct
ttaatccacttcagcccttctgattcaatgctgctttggaatggtgttttgtgggaccgc
cgggtctctgggcctgttcatcgctttgatcagttcacagactatgggggtggaggcttt
catcctgctggcaatgaggttattataaactctgaagtctgggatctgcgcaagttcaga
cttctacgcagcgtgccttcattagatcaaacagcaataacattcaatgcacgcggtgat
gtaatgtatgcaatcttgaggagaaatcttgaggatgtaatgtcagcagtccacgcacgt
cgtgtcaagcatcctctttttgcagctttccgcacagtggatgcaatcaattattcggac
attgctactacccctgttgatcgctgtgttcttgatttcgcaactgaaccaacagattca
tttgttgggctgataactatggatgatcaaaatgagatgtatgcatcagccagagtatat
gaaattggtcgatgtaggccaactgatgatgattctgatcctgatgatgctgaaagcgaa
gatgaggaagatgatgacgatgatgatgatggtgatgatgaagatcctcttttaggccct
ggtctcggcagagagagtgatagtgatgacatgagcaatgatgactatgatagtgcaagt
gacattgatgatgaagatgcagatttcattttggatgatttagactttgacggaggaaca
ggcttattagagattgtgggagaccgagatgaggatgatgatgatagtcaagaacttgaa
tctgcaagtagtgacgatgaggactttgatgataatgactttggttattaa
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integrated database retrieval system
