Lotus japonicus: 130727475
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Entry
130727475 CDS
T04348
Name
(RefSeq) replication protein A 32 kDa subunit A
KO
K10739
replication factor A2
Organism
lja
Lotus japonicus
Pathway
lja03030
DNA replication
lja03420
Nucleotide excision repair
lja03430
Mismatch repair
lja03440
Homologous recombination
lja03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130727475
03420 Nucleotide excision repair
130727475
03430 Mismatch repair
130727475
03440 Homologous recombination
130727475
03460 Fanconi anemia pathway
130727475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lja03032
]
130727475
03400 DNA repair and recombination proteins [BR:
lja03400
]
130727475
DNA replication proteins [BR:
lja03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
130727475
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
130727475
MMR (mismatch excision repair)
130727475
DSBR (double strand breaks repair)
HR (homologous recombination)
130727475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
RMI2
Motif
Other DBs
NCBI-GeneID:
130727475
NCBI-ProteinID:
XP_057434601
UniProt:
I3SHT3
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Position
1:complement(87774772..87780586)
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AA seq
274 aa
AA seq
DB search
MLSSSTNFDANSAFSGGGFMTTDSSHHSDSSPAPLKSRDTQGLVPVTVRQISEASHSGDD
KSNFVINGVGLTNVTLVGMVFEKVEKNTEVNFVLDDGTGRIKCRRWVNETYDTKEMDQIQ
DGMYVRLYGHLKSFQGVRQLVAFSVRPVTNFDEIPFHFIDCIHNHLYSKVKVEGITGNPP
SSDLSLIAARNAPNQAASSNPLYAHGVDQLKGCDKLVFDYLQQHSDTSDESGIHVDELSL
QLRLPLDKIRSSLEVLKQEGYVYSTIDEDHHKKT
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgtcctccaccaacttcgacgctaactcagccttctccggcggcggattcatg
accaccgactcctcacaccactccgactcatccccagcacccctcaaaagccgtgacact
cagggtttggttccagtcacagtgaggcagataagtgaggcttctcactctggtgatgac
aagtccaatttcgtaatcaacggtgtcggtctcaccaatgtaaccttggttggaatggtg
tttgagaaagttgagaaaaacactgaagttaactttgttttagatgatggaacaggaaga
atcaaatgtaggagatgggtgaatgaaacttatgatacgaaggaaatggatcaaatacag
gacggtatgtatgttcgcctttatggccatttgaagagctttcaaggtgtaaggcaactc
gttgccttctctgtgaggcctgtgacaaattttgatgagataccttttcacttcattgat
tgcatacacaaccatctctattccaaagttaaggttgaaggaatcacagggaatcctcca
tcatcagacttatcattgattgcagccagaaatgcaccaaatcaagcagcatcatcaaac
ccgttatatgcgcatggtgtggatcaactcaagggctgtgataaattggtttttgactat
ctgcagcagcactcggacacgtcagatgaaagtggaatacatgttgatgaactatctcta
cagcttagacttccattggataagatcaggtcatcgctagaggttctcaaacaggaaggt
tatgtatactccaccatcgatgaggatcatcacaagaaaacctga
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