Lotus japonicus: 130727658
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Entry
130727658 CDS
T04348
Name
(RefSeq) KH domain-containing protein HEN4-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130727658
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
130727658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_5
KH_KhpA-B
MOEP19
BUD22
DUF6244
Motif
Other DBs
NCBI-GeneID:
130727658
NCBI-ProteinID:
XP_057434838
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All DBs
Position
1:90182497..90187376
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AA seq
681 aa
AA seq
DB search
MASSKRPNAESKRKGKRQKSGGGGSSSLDAAAGGVVFRMLCPATRIGGVIGKGGGIISQI
RQETGVNIKIDEPTPGCDERVIIFSGSEKENGEDNVDKEKEKEKEASNDETESKGKGDEE
EEAEEKGGDNDDVEDKEVEDSQGEKANSNSVIHSAIRKALSLVFDRMVEGVEDTADGDEE
SGKASSFVFRLLILSNQVGCLLGKGGSVIKKMSAESGAQIRILPKDKLPVCASASDEIVQ
ITGGVEVVRKALQSVSLQLLENPPRDHESLSTNFTGPSSHSSSKIPSHNRSFAAGPTDTS
VFHSAPSLISKFHEGAIHGRMRPSQEMLTFRLLCPAEKVGNLIGKGGAIIKSVQQETASE
IKVIDAVPDSEDCVIVISGPAHPDDRISPVQEAVFRVQNRVARAIPDVNEHSMLARVLVS
SNQIGCLLGKGGSIITEMRKLSGAHIRILGKDKIPKCASENEEVIQITGEIEAVHDALLQ
ITTRLKHHFFRDAYPSANYPSNPAFLDNLPPFLPYLGRRGISPPGMYSDLGPPPPHAGFP
LDDRPPFMNNIHRSGIPPHIAERKPWGPQGILEGGGHMGLPDFAGGPPRRILGFGGGNQP
IITHTSATVEVVVPRAVVPEIYGEDGECLRQILQISDAKIMITDPKPGAVETKIIISGTP
EQTHAAQSLIQAFVMSERDSG
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttccaagagaccgaatgcggagtcgaagaggaaagggaaacgccagaaatcc
ggtggtggtggttcttcatcgttggatgcggctgctggcggtgttgttttccgtatgctc
tgccctgctactagaataggcggtgtaatcggcaaaggtggtggcatcatatcacaaatt
cgccaggaaaccggtgtcaatattaagattgacgagcctacacctggttgtgatgagagg
gttatcattttctcgggttctgaaaaggaaaacggagaagacaacgttgacaaggaaaag
gaaaaggaaaaggaggctagtaatgatgagactgagagcaaagggaagggtgatgaggag
gaagaggctgaagaaaagggtggtgataatgatgatgttgaagataaagaggttgaagat
tcgcagggcgagaaggcgaattcgaattcggttattcattcggctattcggaaggctctg
tcattagtttttgataggatggttgaaggagtggaggatacagctgatggtgatgaagaa
agtggtaaagcttcttcgtttgtgtttaggctgctgatcctttctaatcaagttggctgc
cttctgggtaagggtgggagtgtgatcaagaaaatgtcagctgaaagcggggcgcagatt
cggattcttcctaaagataaacttcctgtgtgtgcttcagcatctgatgagattgttcag
atcacaggaggagttgaagttgtcaggaaagctcttcaatctgtctctctccaacttttg
gaaaatccacctcgtgaccatgaatccctgtctaccaattttactgggccgtcatctcat
tcatctagtaaaatcccatcacacaatcgttcctttgctgcggggcctactgatacttct
gttttccattctgctccttctctgatttccaaatttcatgaaggcgccatccatggtcgt
atgaggccttcacaggaaatgcttacatttcgtttattgtgtcctgccgaaaaggtagga
aatttaattggtaaaggtggagcaatcataaagtctgtgcagcaagagacagctagtgaa
atcaaggtcatagatgccgttcctgattcagaggactgtgttattgtcatatctggtcca
gcgcaccctgatgatagaatatcacccgtgcaagaagctgtgtttcgtgtgcaaaataga
gtagccagggctatacccgatgtgaacgagcacagtatgctagcaagggttcttgtttct
tcaaatcaaataggttgtctccttggcaagggtggttccatcataactgaaatgaggaag
ttatcaggtgcccatatccgtatattaggaaaggataagattcctaagtgtgcttcagaa
aatgaagaagtaattcagataactggagaaattgaggcagtgcatgatgctcttttgcaa
ataaccacaagattaaaacatcatttctttcgtgatgcatatccatctgccaattatcct
tcaaatcctgcatttttagataaccttcctccattcctgccttatttggggaggcgaggg
atttcacctcctggaatgtattctgatctaggtccaccacctccacatgcgggttttccc
cttgatgatcgccctccttttatgaataatatacacagatcaggcattcctcctcacatt
gctgaaaggaagccttggggtcctcaggggatacttgaaggtggtggacacatgggcttg
ccagactttgccggaggtcctcctagaagaattttgggatttggaggagggaaccaaccg
attatcactcacacaagtgccactgtcgaagttgttgttcctcgagcggtggtgcctgaa
atatatggggaagatggtgaatgcctgagacaaatacttcagatctctgatgcaaagatt
atgattactgatccaaagcccggagctgtggaaactaaaattataatttctggaacccca
gagcaaactcatgctgcacaaagtcttattcaggcgtttgtcatgagtgagagggattct
ggttga
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