Lotus japonicus: 130727694
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Entry
130727694 CDS
T04348
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
130727694
Enzymes [BR:
lja01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
130727694
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Endotoxin_C
Motif
Other DBs
NCBI-GeneID:
130727694
NCBI-ProteinID:
XP_057434887
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Position
1:complement(90846227..90851064)
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AA seq
673 aa
AA seq
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MPPLGVQLSIQDRHVVMDNGILQVTLSNPEGIVTGIQYNSIDNLLEVLNDESNRGYWDLV
WSSPTSTGTTGRFDVIKGTTFKVIVENEDQVEVSFTRMWDASLEGKLVPLNIDKRFIMLR
GCSGFYSYAIYEHLEDWPAFNLDETRIAFKLRKEKFHYMAMADNRQRDMPLPDDRVPPKG
QPLAYPEAVLLVNPIEPELKGEVDDKYQYSCDNKDSQVHGWICKDPGVGFWLITPSNEFR
SGGPLKQNLTSHVGPTTLAVFLSAHYSGEDLVPKFKAGEAWKKVFGPVFIYLNSTDDGSA
VPNLWDDAKLQMLVEVQSWPYSFPDSDDFSKWDERGNVSGRLLVRDRYIDDDYISAKGAY
VGLAPPGEVGSWQRECKNYQFWAKADDDGYFTISNIRVGDYNVYAWVPGFIGDYKYDVTM
TITEGIHQPVLSLLFLKLQKVFVLSILYLVSMKTVCDIDIGDLVYEPPRDGPTLWEIGIP
DRSAAEFYVPDPNPKYINKLYVNHPDKFRQYGLWERYAELYPDKDLIYTVGVSDYTKDWF
FAQVTRKKDDNTYQGTTWQIKFKLDNVNKSSIYKLRVALASATFSELQVRVNDPKANRPL
FSSGLIGRDNSIARHGIHGLYWLYNVDIPGTRLVEGDNTIFLTQTRGNGPFQAIMYDYIR
LEGPSESSFNKKN
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgccacctcttggggtgcaactcagtattcaagatcgtcatgtggtgatggacaatggc
atactacaagtcacattgtccaatcctgagggaattgtgactggaattcagtacaatagc
attgacaacttgcttgaagttttgaatgacgaatctaacagaggatattgggaccttgtt
tggagctcaccaaccagtacaggaaccaccggtagatttgatgtgataaagggaaccact
ttcaaagttatagtggaaaatgaggaccaagttgaggtatccttcactaggatgtgggat
gcttcccttgagggcaagttggttcctttgaatattgataagaggttcataatgcttcgt
ggttgttctggcttctactcgtatgcaatttatgagcacttggaggattggcctgctttc
aatcttgacgaaacaagaatagctttcaagcttagaaaagagaagttccattatatggca
atggcagataatagacaaagagacatgcctcttccagatgacagagtaccacctaaaggc
caaccacttgcatatccagaagcagttctacttgtcaaccctattgaaccagaactaaaa
ggagaggtggatgacaagtaccaatattcatgtgataacaaagatagccaagttcatgga
tggatttgcaaggatccgggtgtcggattctggctaattacgcctagcaatgagtttcga
tctggtggacccctcaaacaaaacttaacttcccacgttggacctaccacgcttgctgtg
tttctaagcgctcattatagcggagaggatctggtgcctaagttcaaagctggtgaggca
tggaagaaagtttttggtccagtttttatctatttaaattctactgatgatggaagtgcc
gtccctaatctatgggacgatgctaaactgcagatgttggtggaagtccaaagctggccc
tacagttttcctgattcagatgatttctcaaagtgggatgaacgtggtaatgttagtggc
agacttttggttagagacaggtatatagacgatgactacatatcagcgaaaggtgcctac
gttggcttggctccacctggagaagtgggatcttggcaaagagaatgcaagaattaccag
ttttgggctaaagcagatgatgatggctatttcaccatcagcaatattcgtgttggcgac
tataatgtgtacgcatgggtacctggttttattggtgactataaatatgatgtgactatg
accataacagaaggtattcatcaaccagttttatcacttttatttttgaagctacagaaa
gtttttgtgctaagtattttgtatttggtttctatgaaaacagtttgtgacatagacatt
ggggatcttgtatatgagccaccaagagatggtcccacattgtgggaaataggcatccct
gatcgctctgctgccgagttctatgttcctgatccaaatcccaaatatatcaacaaactc
tatgttaatcatcctgacaagtttaggcaatatgggttatgggagagatatgcagaatta
taccctgacaaagacttgatctacactgttggtgttagtgactacaccaaagattggttc
tttgctcaagttaccaggaagaaagatgacaatacttatcaaggaaccacatggcaaatc
aagtttaagcttgataatgtgaacaaaagcagtatttataaacttcgagtggctttggca
tcagccacattttctgaacttcaggttcgagttaatgatccaaaagcaaatcgtcctcta
ttttcaagtggattgattggaagggataactcaatcgctagacatggaattcatggcctt
tattggctttacaatgtggacataccaggcactcgacttgtagaaggagataacaccatc
ttcttgacacagacaagaggcaatggcccatttcaagctattatgtatgattatattcgt
ttggaaggtccatctgagtctagtttcaataagaaaaattaa
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