Lotus japonicus: 130727792
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Entry
130727792 CDS
T04348
Name
(RefSeq) ruvB-like protein 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
lja
Lotus japonicus
Pathway
lja03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130727792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lja03036
]
130727792
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lja03037
]
130727792
Enzymes [BR:
lja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
130727792
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
130727792
Chromatin remodeling factors
SRCAP complex
130727792
INO80 complex
130727792
INO80 complex (yeast)
130727792
SWR1 complex
130727792
ASTRA complex
130727792
Cilium and associated proteins [BR:
lja03037
]
Motile cilia and associated proteins
Dynein assembly factors
130727792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_19
Mg_chelatase
bpMoxR
AAA_25
AAA_18
TsaE
DnaB_C
Cdc6_lid
AAA_11
AAA_7
nSTAND3
NPHP3_N
ResIII
IstB_IS21
Parvo_NS1
AAA_28
AAA_33
RNA_helicase
NACHT
Motif
Other DBs
NCBI-GeneID:
130727792
NCBI-ProteinID:
XP_057435024
LinkDB
All DBs
Position
1:92003122..92007932
Genome browser
AA seq
458 aa
AA seq
DB search
MEKMKIEEVQSMSKKQRVATHTHIKGLGLEASGRALPFAAGFVGQAEAREACGLVVDMIR
QKKMAGRALLLAGPPGTGKTALALGICQELGTKVPFCPMVGSEVYSSEVKKTEVLMENFR
RAIGLRIKENKEVYEGEVTELSPEETESVTGGYGKSISHVIIGLKTVKGTKQLKLDPTIY
DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQD
VTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEVNKVVNRYIDEGVAELVPG
VLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGTDMASPHGIPVDLLDRL
AIVRTLIYGPAEMIQILAIRAQVEELVVDEESLAFLGEIGQRTSLRHAVQLLSPASIVAK
MNGRDNICKADLDEVCSLYLDAKSSAKLLQEQQEKYIT
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggagaagatgaaaatagaagaggttcagtccatgtcgaagaaacagcgtgttgctacc
cacactcacatcaaaggccttggtcttgaggctagtggaagagcattgccatttgctgct
gggtttgtggggcaagcagaggctagagaagcatgtggccttgtggttgacatgatacgc
cagaagaagatggctggccgtgccctcctccttgccggaccgcccgggactggcaagact
gctttagcacttgggatatgtcaggagctcggaaccaaggttccattttgcccaatggtt
ggctcagaagtatactcatcagaagtaaagaagacagaagttcttatggaaaatttccga
cgggctattggtctgcgtattaaggaaaacaaggaagtatatgaaggagaggtaaccgag
ctctctccagaagaaactgagagtgtaacaggcggttatggtaaaagtattagtcatgtg
ataattgggttgaagacagtgaaaggaaccaagcaactcaagttggaccccaccatatat
gatgctttgattaaggaaaaggtagctgttggggatgttatatatattgaggcaaatagt
ggggctgtgaaaagggtaggccgaagtgatgcttttgctacagagtttgaccttgaagca
gaggaatatgttccacttcctaaaggagaggttcacaaaaagaaggagattgttcaggat
gtaaccctacatgatctggatgctgccaatgcacgacctcaaggagggcaagatattcta
tctcttatgggtcagatgatgaaacccaggaaaacagaaatcactgacaagttgagacaa
gaagttaataaggttgtcaaccgatatattgatgaaggtgtagcagagcttgttcccgga
gttctgtttattgatgaggtgcatatgctagatatggagtgtttttcctatcttaatcgt
gctttagagagctccctatctccaatagttatctttgcgacaaatagaggaatttgcaat
gtgagagggactgatatggccagtcctcatggcatacctgttgacctgctggaccggctg
gcgatcgttcgaacactaatctatggtcctgctgagatgatacagattctagctatccgt
gctcaagtagaggaactggttgtggatgaggaaagtttagctttcctaggggagattgga
caaaggacatctttaaggcacgcggttcagcttttatcacctgccagcattgttgcaaaa
atgaatggccgagacaacatttgtaaggcggatcttgatgaagtttgttcactatatttg
gatgccaaatcatcagccaaactacttcaagagcagcaggaaaaatacatcacatga
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