Lotus japonicus: 130727806
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Entry
130727806 CDS
T04348
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lja03041
]
130727806
Spliceosome [BR:
lja03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
130727806
Other components
Complex C specific factors
130727806
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Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
130727806
NCBI-ProteinID:
XP_057435037
LinkDB
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Position
1:complement(92135113..92139482)
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AA seq
872 aa
AA seq
DB search
MDEDQEMDRFGMDNDFEGGEWIAGEYYYRKRKEKHAQTKDDVLYGVFADSDDDYSSRKRR
KDRSMSKKQDLTKPVNFVSTGTFMPNEEIDKNSREKDEDERDGDVSDGRPGLGLGMGGLG
SASTSGSGLGFNSGRAAGNGSDRNNDESDENDDEKFLPTAFGKMIKEGAMRRERERQMER
KEKKRGDRQGAAGQDVSGDVGKFEKHTKGIGMKLLERMGYKGGGLGKNEQGILKPIEARL
RAKNSGLGFNNETPAAPLPALQVESQSVSEAAQPTVGRTKERSWSRQSRSKKKQKEEEYV
TAEQLLASKQEEDSEVVHRILDMRGPQVRVYTNLSDLNAEEKAKERDVPMPELQHNVGLI
VRLAEAEIQEIDRDLRRERETALSLKKEKEKLESEAAFQKKQLDGFEKIMDVLDQIGEEN
TAGTLTLDSLAQCFRELHQKYADNYKLCNLSCIACSYALPLFIRVFQGWDPLRNPSHGLE
LVSQWKTLLQGEDCLDIWDDSSPYAQLVSEVVLPAVRISGINTWQARDPEPMLRFLESWE
KLLPSSVLATILDNIVMPKLSSAVDTWEPHRETIPIHTWVHPWLPLLGHKLEGIYQVIRF
KLSTVLGAWHPSDGSAYAILSPWKTVFDSVSWEQLMLRFIVPKLQLVLQEFQVNPANQNL
DHFYWVMNWASAIPIHLMADMMEKFFFSKWLQVLYHWLCSNPNFEEVTKWYLGWKELIPK
ELLANESIRFQLNRGLGMMNQAVEGMEVVQPGLKENISYLRVLEQRQFEAQQKAAYAQQQ
AAASLGGAVNADGAHELSLKEVIEAHAQQHGLLFKLKPGRMHNGHQIYGFGNVSIIIDSL
NQKVYAQNEETWSLESLQGLVALHHKSLGKRR
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaccaagagatggaccgattcggaatggacaacgatttcgaaggcggcgaa
tggattgccggcgagtattactaccggaagcgcaaagagaagcatgcacaaaccaaagac
gatgtgctctatggagtttttgccgactccgacgatgattattccagcagaaaacgccgc
aaagatcgcagtatgtccaaaaagcaagacctcaccaaaccggtgaattttgtctctaca
ggtacttttatgcctaatgaggagattgataagaattctagagagaaggatgaggatgag
agggatggtgatgttagtgatggtaggcctggtttaggtcttggtatggggggattaggg
tctgctagcacatcagggtctggtttagggtttaattccggtcgtgctgcgggcaatggt
tctgatagaaacaatgatgagtcggatgagaatgatgatgagaagttcttgccgacggcg
tttgggaagatgattaaggagggggcaatgaggagggaaagggagaggcagatggagaga
aaggagaagaagagaggggacaggcagggtgctgctggtcaggatgtatcgggtgatgtg
gggaaattcgagaagcatactaagggaatagggatgaagttgttggagaggatgggttat
aaagggggtggtcttgggaagaatgagcagggtattttgaaacctattgaggccagattg
agggctaagaactctggtcttgggtttaataacgagactccggctgcgccgttgcctgct
ttgcaggtggagagccagagtgtgtctgaagctgcccagccgacggttggtaggacgaaa
gagaggtcgtggtcaaggcaatcgaggtcgaagaagaagcaaaaggaggaagaatatgta
actgccgagcagttgttggcgagcaagcaagaagaagattctgaagttgttcacaggatt
ttagatatgaggggaccgcaggttcgagtgtatacaaatttgtctgacttgaatgctgag
gagaaagcaaaggaaagagatgtcccgatgccagaacttcagcataacgtagggttaata
gttcggttggccgaggctgagatccaagagattgatagagatttgaggagagagagggag
acagcacttagcttgaaaaaagaaaaggagaagttagaaagtgaggcagcatttcaaaag
aagcagctggatggttttgagaaaataatggatgtgttggaccaaatcggagaagagaac
actgcaggaacattaacactggattcccttgcccaatgctttagggagttgcaccagaaa
tatgctgataactacaagttgtgtaatttatcatgcattgcttgctcgtatgccctgcct
ttgtttattagagtgttccaaggatgggatcctcttcgaaatccatcccatgggctggag
ttggtatcacagtggaagacattgcttcaaggagaagattgtctcgacatttgggatgat
tcatcaccttatgctcagttggtttcagaggttgtgttgccagctgttagaatatctggt
atcaatacctggcaggcacgggatcctgagccaatgctgcggtttctggagtcgtgggaa
aagttgcttccttcttcagttcttgcaactatattggacaatatagtcatgccaaaactg
tcaagtgctgtagatacttgggaaccacatcgtgagaccattcctatccacacttgggtg
catccatggttacctctgctagggcacaagttggagggtatctaccaggtgattcgtttc
aaattgagtactgttcttggtgcgtggcacccaagtgatggttctgcgtatgctattctg
tctccttggaagactgtatttgattctgtaagttgggaacaacttatgcttcgttttatt
gtaccaaagttgcagcttgtcttgcaagaattccaagtgaacccagcaaatcaaaatctt
gatcacttttattgggtaatgaactgggcttcagctattccaattcatctcatggctgat
atgatggagaaattcttcttttccaagtggcttcaggttttgtatcattggttgtgctca
aatcccaactttgaagaagttacaaaatggtatttgggatggaaagaacttattccaaaa
gaacttttggcaaatgaaagtattcgattccagcttaatcgcggtcttggtatgatgaat
caggctgttgaaggtatggaggtggtccaacccggtttaaaggagaatataagctatctt
agggtacttgagcaaagacaatttgaggctcagcagaaagcagcctatgctcaacaacaa
gctgctgcaagcttgggcggtgctgtcaatgctgatggtgcgcatgagttgagcttgaaa
gaagtcattgaggcccatgctcagcaacatggtttactattcaagctcaaacctggtaga
atgcacaatggtcaccagatatatgggtttggtaatgtcagcataataatagactctcta
aatcaaaaggtatatgcccaaaatgaggaaacatggtctttagaatctcttcaaggattg
gtagcgttgcatcataaatcccttggtaaaagacgctga
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