Lotus japonicus: 130728192
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Entry
130728192 CDS
T04348
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lja
Lotus japonicus
Pathway
lja00040
Pentose and glucuronate interconversions
lja01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130728192
Enzymes [BR:
lja01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
130728192
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
130728192
NCBI-ProteinID:
XP_057435546
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Position
1:complement(54020909..54024426)
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AA seq
406 aa
AA seq
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MTSILLSLVILLFSFLIPILISSSHVQNPELAVQEVNRKINASIARRNLGYLSCGSGNPI
DDCWRCDTNWENNRKRLADCAIGFGKNAIGGRDGKIYVVDDASDDDPVTPKPGTLRHAVI
QDEPLWIIFAGDMVIKLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNVIIHGIHIH
DCKQGGNAMVRDSPRHYGWRTISDGDGVSIFGGSQVWVDHCSLSNCKDGLIDAIHGSTAI
TISNNYMTHHDKVMLLGHSDSYTDDKNMQVTIAFNHFGEGLVQRMPRCRLGYFHVVNNDY
THWEMYAIGGSANPTINSQGNRFVAPDDRFSKEVTKHEDAPESEWQNWNWRSEGDMMVNG
AFFTATGAGASSSYARASSLSARPSSLVASITSGSGALDCKKGSPC
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcattctactctctttggtaatcttgctcttctcttttctcattccaatcctc
atttcctcctcacatgttcaaaaccctgaattggcagtgcaagaagtaaacaggaaaatc
aatgcctctatagctaggaggaacttggggtacctatcatgtgggagtggaaaccctatt
gatgattgctggaggtgtgacaccaattgggagaacaataggaaaaggctagcagattgt
gcaataggattcggcaagaacgcaattggaggcagggacggcaagatctacgtagtggac
gatgccagtgacgacgaccccgtgaccccaaagccgggtacgctccggcacgcggtgatc
caggacgagccgctctggatcatctttgccggagacatggtgatcaagttaaaagaagag
ctgatcatgaactctttcaaaaccattgacggcaggggtgcgagcgtgcacattgctggc
ggtccttgcataacaatacagtacgtgaccaatgtgatcattcatgggatacacatccat
gattgcaagcagggtgggaatgctatggtgcgggactccccacgacactatgggtggagg
accatatcagacggtgatggcgtgtcgatctttggagggagccaggtgtgggtggaccat
tgctcgttgtcgaattgcaaggatggattgatcgatgcgattcatgggtccaccgcaatt
accatatccaacaattacatgactcaccatgataaagtcatgttgttgggtcacagcgat
tcttacacagatgacaagaacatgcaagtcacaatcgctttcaaccactttggtgaaggt
cttgttcaaagaatgccaaggtgtaggcttggatacttccatgtggtgaacaatgactac
actcactgggaaatgtatgccattggaggaagtgctaaccccaccatcaacagccaaggc
aatagatttgttgcacccgatgacagatttagcaaagaggtaacaaagcatgaagatgcc
ccagagagtgaatggcagaactggaactggagatcagaaggggacatgatggtaaacggt
gcatttttcacagcaacgggtgctggagcttcttctagctacgccagagcttcaagctta
agtgcaagaccatcttcccttgttgcttccataacaagtggttctggagcacttgactgc
aagaaaggttctccttgctga
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