Lotus japonicus: 130728202
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Entry
130728202 CDS
T04348
Name
(RefSeq) flap endonuclease GEN-like 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lja03400
]
130728202
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130728202
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
Motif
Other DBs
NCBI-GeneID:
130728202
NCBI-ProteinID:
XP_057435560
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Position
1:complement(98017250..98023233)
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AA seq
607 aa
AA seq
DB search
MGVGGNFWDLLKPYARNEGFEFLRNKRVAVDLSFWIVQHRNAIKGNVRKPHLRVTFFRTI
NLFSKFGALPVFVVDGTPSPLKSQARITRFFRSSGIELASLPVPEGVSAERNRSFSKYVQ
ECVELVELLGMPVLKAKGEAEALCAQLNSEGHVDACITADSDAFLFGAKCVIKCFSPNSK
EPFECYYMSDIEAGLGLKRKHLIAITLLVGNDYDMSGVQGIGLDSALRFVQAFSEDDILN
RLHEIGKGNASEIPISLKSEDNMDMDGNSPNTKQSHCSFCGHPGNKRDHMKLSCEFCLTN
DSEGCLKKPEGFKCDCLSCGMNRKHQGQKRLENWYTKICHKIAKEPNFPKDEIIDMFLCN
NNGYFSANDRPQISWERPNIEMLIVFLNFHQNWEPSYIRRMIFPMMSTIFLRDMATTTVE
SLLFGQYEFDSLERVKMRYGYQFYVVKWKRAGGSIASKIPSNESSTQEDVRESDETVDLL
DDGDLPEIRDDGGCSFLLTDENMDLVGAAFPAEVKRFQQEQELKDMKKRKNSTSKVQEKE
RSASPNSRSIQLNITGFYPSTKIKHQPKRGEESSKDVDSQGSGGSKTKRETSSANLSKSV
RRRLLFD
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgggggttggtggtaatttctgggacctgttgaagccctatgcccgcaacgaaggtttt
gaattcttgaggaacaagcgagttgctgtggacctttcgttctggattgttcagcacagg
aatgccatcaaggggaatgtcaggaagcctcatcttagggtcacattcttccgcactatc
aatttgttctccaagtttggagcattgccggtgtttgttgttgatgggactccatcccca
ctgaaatcacaggcaaggattacaagatttttccggtcttctggtattgaattggctagc
ttgccagtgcctgaaggtgtttcagccgagaggaaccgatcattttcaaaatatgttcaa
gaatgtgtggaacttgtggagctacttggaatgcctgtattaaaggctaaaggagaggct
gaagcactctgtgcccaattaaatagtgaaggtcatgttgatgcttgcatcacagctgac
agtgatgcattcctctttggggccaaatgtgttataaagtgtttctctcccaattctaaa
gaaccgtttgaatgctactatatgtcagatattgaagctgggcttggattgaagaggaaa
cacttaatagctatcactcttttggttgggaatgattacgatatgagtggtgttcaaggg
attgggcttgacagtgctcttcgttttgttcaagctttcagtgaagatgatatattgaat
agattacatgagataggcaaagggaatgcttcagaaattcccatcagccttaaatccgag
gacaatatggatatggatggaaactcaccaaatacgaaacaatctcactgctcattctgt
gggcatccaggcaacaaaagggaccatatgaagctttcttgtgaattttgtctcacaaat
gacagtgaaggttgcctgaaaaagccagagggttttaaatgtgattgcttgtcttgtggt
atgaataggaaacatcaaggacagaaaaggctggaaaattggtacacaaaaatttgtcac
aagattgcaaaggagccaaattttccaaaggatgaaatcattgatatgtttttatgcaat
aacaatggttacttttctgcaaatgacaggcctcagatctcatgggaaagacccaatatc
gagatgctgattgtttttttaaacttccatcagaactgggagccatcctatattcggcgg
atgatatttcctatgatgtccaccatcttcttgagagacatggctacaactaccgtcgaa
agcttgttatttgggcagtatgagtttgattctttagaacgtgtgaagatgagatatggt
tatcagttttatgtggtcaaatggaaacgtgcaggaggcagcattgcatctaaaattcca
tcaaatgaatctagcacgcaagaagatgttagagagtcagatgaaacggtggatctgctg
gatgacggtgatcttcctgagattcgtgacgatggtgggtgtagtttcctgttgacagat
gaaaatatggaccttgtaggagctgcttttccagctgaagtcaaaaggtttcagcaggaa
caggaactgaaggatatgaaaaaaagaaagaattcaacctcaaaagttcaagaaaaagaa
agatcagcatcaccaaattcaaggagtatccagctaaatatcacagggttctacccatca
accaaaatcaaacatcaaccaaaacgaggagaagagtcatccaaggatgttgatagccaa
ggaagtggaggctcaaaaacgaaaagggaaacttcaagtgctaatctttctaaatccgtg
aggcgccgccttttatttgactaa
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