Lotus japonicus: 130728854
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Entry
130728854 CDS
T04348
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
lja
Lotus japonicus
Pathway
lja03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130728854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lja03021
]
130728854
03036 Chromosome and associated proteins [BR:
lja03036
]
130728854
Transcription machinery [BR:
lja03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130728854
Coactivators
SAGA/TFTC/STAGA complex
130728854
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
130728854
STAGA complex
130728854
TFTC complex
130728854
SAGA complex
130728854
SLIK complex
130728854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
130728854
NCBI-ProteinID:
XP_057436421
LinkDB
All DBs
Position
1:106795661..106802296
Genome browser
AA seq
544 aa
AA seq
DB search
MSIVPKETVEVIAQSIGINTLSPDVALAVAPDVEYRMRQIMQEAIKCMRHSRRTTLTVDD
VDAALNLKNVEPIYGFASGGPLRFKRAVGHRDLFYIDDKDVDLKDVIEAPLPKAPLDTAI
TCHWLAIEGVQPAIPENAPIEVISAPPDVKKPDQNNDGLPVDIKLPVKHVLSRELQLYFD
KVTELTLNESDSVLFKEALVSLATDSGLHPLVPYFTCFIADEVSHSLNNFPRLFALMRVV
SRLLQNPHIHIEPYLHQLMPSIVTCLVAKRLGSRLSDNHWELRDFTANLVASICKKFGHV
YSNLQSRLTKTLLNAFLDPKKALTQHYGAIQGLGALGPNVVRLLLLPNLETYIRLLEPEM
QLEKQKNEIKRHEAWRVYGALLRAAGQCIYDRLKMFPTLPSPLPQAVWKTNARVLTSSTL
KRKASHEQLEEQPPLKKSATDGEADVIMTNSSPSHKQGETGTQDSSVDSIAAASTSSRQM
KNETTLDGEVKSNKVDTQALKISAALTQVWKDELNSGRTLASLFELFGEAILPFIKAPEM
YVFL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagcattgttcccaaagagaccgtggaggttattgcacagagtattgggattaacacc
ttgtctcccgatgttgctcttgctgttgctcctgatgttgagtaccgtatgcgtcagatt
atgcaggaagcaatcaagtgcatgcggcattctaggagaaccactttgacagtagatgat
gttgatgctgcactcaacttgaagaatgttgaaccaatatatggatttgcatctggcggt
cctttacggttcaaaagagctgttggacatagagatttattttacattgatgacaaggat
gtagacttaaaagatgtcattgaagctcctttaccaaaagcaccccttgatactgcaatt
acgtgccactggcttgccattgaaggtgtgcaacctgctattccggaaaatgctcctata
gaggtaatttcagctcctcctgatgtaaaaaagcctgatcagaacaatgatggacttcca
gttgacatcaagttacctgttaagcatgtattatctagagagcttcagctgtattttgat
aaagtgactgaactaactttaaatgagtcggattcagttctatttaaagaagcattagta
agtttggctactgattcaggactacatccattagttccttatttcacatgctttatagct
gatgaggtttctcacagcttgaataattttcctcgtctatttgccttgatgcgagttgtt
agtaggcttctgcaaaaccctcatatccatattgaaccttatctacaccagttgatgcct
tctattgtgacctgccttgttgctaaaaggttgggcagtagattgtcagacaaccattgg
gaacttagagacttcacagctaatctggtagcctcaatatgtaaaaagtttggacatgtt
tatagcaatctacagtcccggttgacaaaaacattgctgaatgcattcttggatcccaag
aaggcattgacgcaacactatggagcaattcaggggttaggagcactgggacctaatgtg
gttcgccttcttttgctaccaaatcttgaaacatatataagacttcttgaaccagagatg
cagctcgagaagcagaaaaatgaaataaaaaggcatgaagcttggcgtgtttatggagcc
ttgctgcgtgctgcaggtcagtgtatatatgatcgactcaagatgttccctacattacca
tctcctctccctcaagctgtctggaagaccaatgctagagttcttacctcttcaactctt
aaacgcaaggcaagccatgagcaattggaagagcagccccctttaaagaaatctgctact
gatggtgaagctgatgtaattatgacaaattcgtcaccgtctcacaagcaaggggagaca
gggactcaagattcttcagttgattcaatagcagccgcatcaacatcttctaggcagatg
aaaaatgagaccactttagatggcgaagttaaaagtaacaaggtagatactcaggcattg
aagatatctgctgccctcacccaggtttggaaggatgagctgaattcaggacgtaccctg
gcgtcactgtttgagttgtttggtgaagccattcttcccttcattaaggctcctgagatg
tacgtgttcctgtaa
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