Lotus japonicus: 130729360
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Entry
130729360 CDS
T04348
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lja04121
]
130729360
Enzymes [BR:
lja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130729360
Ubiquitin system [BR:
lja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130729360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4_2
zf_RING_Vps8
zf-C3HC4_3
zf-ANAPC11
Prok-RING_1
Prok-RING_4
FANCL_C
zf-FCS_1
DUF1125
zf-RING_16
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
130729360
NCBI-ProteinID:
XP_057437080
LinkDB
All DBs
Position
1:19786971..19787417
Genome browser
AA seq
148 aa
AA seq
DB search
MGLSSLPAPSEGVLCVLLVNTVMSISIFKGIVRTILHIVGIHLSSPDASQNPPESFEVHL
SPSESYIEEFRSRTPTLRFDSVCCSKQHEHDDCSVCLAQFEPDSEINRLSCGHLFHKVCL
EKWLDYWNITCPLCRTPLMPEDDNTPCF
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgggtctctcaagtctcccagcaccatctgaaggagtgttatgtgtgcttcttgtgaac
actgtgatgtccatttccatattcaaaggcattgtcagaacaattctacacattgttggt
atccatctttcttcaccagatgcctcccaaaacccacctgaatcatttgaagtccatctc
agcccctctgagagttacattgaagagttcagaagcaggactccaacacttagatttgac
agtgtttgttgcagtaagcaacatgaacatgatgactgttctgtttgtcttgctcagttt
gaaccagattcagagattaaccgtttgtcctgtggccatctcttccataaagtttgcttg
gagaagtggttggactactggaacattacatgccctctttgcaggactccattaatgcct
gaagatgacaacactccttgcttctag
DBGET
integrated database retrieval system
