Lotus japonicus: 130729650
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Entry
130729650 CDS
T04348
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
lja
Lotus japonicus
Pathway
lja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130729650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lja03041
]
130729650
Spliceosome [BR:
lja03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
130729650
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
130729650
NCBI-ProteinID:
XP_057437449
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Position
1:complement(116573916..116583876)
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AA seq
485 aa
AA seq
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MATLADSFLADLDELSDNEAEIPEDNDADAADMEEDIDGDLADLENLNYDDLDSVSKLQK
TQRYVDIMQKVEEALKRSSDASNQGVDLEDDPEYQLIVECNALSVDIENEIVIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAIIMVVSVTASTTTGKP
LPEEVLSKTIEACDRALALDSAKKKVLDFVESRMGYIAPNLSSIVGSAVAAKLMGTAGGL
TSLAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQTTPPALRMRACRLLAAK
STLAARVDSIRGDPSGRTGRSFKDEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAVTDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSMGQSKLAA
KVAKKFKEKSYGSSGATSGLTSSLAFTPVQGIELSNPQAHAHQLGTGTQSTYFSETGTFS
KIRRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctacacttgccgattcttttctcgccgacctcgatgaactctctgataacgaagct
gaaattcccgaggataatgacgctgatgctgcagatatggaagaagatattgatggagac
ttggctgatctagaaaacctcaactatgatgacttggacagtgtttccaagctgcagaaa
acccagagatacgttgatattatgcagaaagtggaagaagcccttaaaaggagttcagat
gcatccaatcagggggtagatttagaagatgatcctgaataccaattgattgtggaatgc
aatgcactgtcagttgacattgagaatgaaattgttattattcacaattttattcgtgac
aagtatcgcttgaaatttccagagcttgagtcactggtgcatcacccaattgattatgca
cgtgttgttaaaaagataggaaatgaagtggatctgactcttgttgatctagaagggctt
ttaccctcagccattatcatggttgtctcagttacagcgtcaactacgactggcaaacca
cttcccgaagaagtccttagtaagacaattgaggcttgtgatcgagctcttgctcttgat
tcagcgaagaagaaagttcttgattttgttgagagtagaatggggtacattgcacctaat
ctttcttccatagttgggagtgctgttgcagctaaactcatggggacggctggtggttta
acatctcttgcaaagatgcctgcttgtaatgttcagcttcttggtgccaagaaaaagaat
cttgctggcttctccaccgcaacatctcaatttcgtgtaggttacctagagcaaacggaa
atatttcagaccactcctcctgctttaaggatgcgggcatgccgactcctggctgcaaag
tctacacttgcagcacgggtagattcaattcgtggggatccatctgggagaactgggagg
tctttcaaggatgagatccacaaaaaaattgaaaagtggcaagagccccctcctgccaag
caacccaaaccccttccagttcctgattcagagcctaaaaagaagagaggtggtcggcgt
cttaggaagatgaaggaaaggtatgcagtaacagacatgaggaagttagccaacaggatg
caatttggaatccctgaagagagttctttaggtgatggtctgggtgagggttatggaatg
cttggtcaggctggcagtggcaagcttcgtgtgtctatgggtcaaagtaaacttgctgca
aaagttgctaagaaattcaaggaaaagagctatggcagcagtggtgctacatctggttta
acctcaagtcttgcatttactcctgtgcaggggattgagctgtcaaatccacaggcccat
gcacatcaacttggtactggaactcaaagtacctatttctctgaaacaggaacattttcg
aagatcaggaggacttga
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