Lotus japonicus: 130729769
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Entry
130729769 CDS
T04348
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
lja
Lotus japonicus
Pathway
lja03013
Nucleocytoplasmic transport
lja03015
mRNA surveillance pathway
lja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130729769
09122 Translation
03013 Nucleocytoplasmic transport
130729769
03015 mRNA surveillance pathway
130729769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130729769
03041 Spliceosome [BR:
lja03041
]
130729769
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
130729769
Spliceosome [BR:
lja03041
]
Common components
Common spliceosomal components
Cap binding complex
130729769
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
Motif
Other DBs
NCBI-GeneID:
130729769
NCBI-ProteinID:
XP_057437590
LinkDB
All DBs
Position
1:complement(118580639..118600138)
Genome browser
AA seq
864 aa
AA seq
DB search
MSSWRSLLLRIGDKSPEYGASSDFKDHIETCFGALRREPDLSQDEILEFVLACSEQLPHK
IPLYGTLIGLINLENEDLVKKFVEKTQTKFQDALDSGNCNGVRILMRLITVMMCSKVVQP
GSLVGVFETFLSSAATTVDEEKGNPLWQPCADFYITCILSCLPWGGAELVEQVPEDIERV
MVGVEAYFSIRRRTFDTGLSFFESDVEIERDVNHKDFLEDLWDRIQGLSSNGWKVESVPR
PHLSFEAQLVAGKSHEFGPISCPNLPNPPSDPSGISIGKQKHEAELKYPQRMRRLNIFPS
SKTEDIQPIDRFVMEEYLLDVLLFFNGCRKECAFFMAGLPVSFRYEFLMAETIFSQLLML
PQPPFKPVYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIVDLDMECRTRLILWFSHHLS
NFQFIWPWEEWAFVLDLPRWAPQRVFVQEVLEREVRLSYWEKVKQSIENAPGLEELLPPK
GGTNFSFGAEDDKENNELVLSGELNNMVKGKVPVREIISWIDESVFPNNGLEVTLRVVVQ
TLLNIGSKSFTHLITVLERYGQVIAKVCPDEDKQVMLIAEVSSFWKSNTQMTAIAIDRMM
GYRLVSNLAIVRWVFSAENTELFHTSDRPWEVLRNAVSKTYNRNSDLRKEILALKKNISS
AEEIAKEAKAELDAAESKLTLVDSEPVLGENPVRLNRLKLRAEKSKEEVVSLQESLEAKE
ALLARAAGENEALFVLLYKSFSNVLKERLPKGSEARTLRELKSVQVDEMAVDPEEPSSME
LDNENQKPEDSQSNGGKKSNAYNIGEKEQWCITTLGYVKAFSRQYASEIWPLIEKLDAEV
MTEEVPPLFRSAVYSALRRPINDA
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttggagaagtcttcttcttcgaatcggcgacaagagccccgaatatggagct
tcctccgacttcaaagaccacattgaaacctgctttggcgcacttcgccgagaacctgac
ctctcccaggatgagattttggagttcgttctcgcatgttccgagcaattgcctcacaag
attcctttgtatggaaccctgattggcttgattaacttggaaaatgaggacttagtgaag
aagtttgtggagaaaacacaaacaaaatttcaggatgcattagattctggaaactgcaac
ggagttcgaattctgatgcggcttataactgttatgatgtgtagtaaggttgttcagcct
ggctctttggtgggcgtctttgaaacatttttatcgtcagctgccacaacagttgatgaa
gaaaaaggaaatccgttatggcagccatgtgctgacttttacataacttgcattttatca
tgcctcccatggggtggggcagaacttgttgagcaagttcctgaagatattgagagagtg
atggttggtgttgaagcttactttagcatcagaaggcgtacttttgacactggtttatcc
ttctttgagagcgatgttgaaattgagagagatgttaaccacaaggattttttggaagac
ttgtgggacagaatacagggtttatcaagcaatggatggaaagttgaaagtgttccaaga
cctcatctttcatttgaagctcagctggttgctgggaagtcccatgaatttgggccaata
agctgccccaacttaccaaacccgccttcagatccatctggcatatctattggtaaacaa
aagcatgaggcagaattaaaatatcctcaacggatgcgtcggttaaacatatttccttct
agtaaaactgaggatatacagccaatagatcgatttgttatggaagagtatctgctagat
gtgcttctgttcttcaatggctgtcgaaaggaatgtgcttttttcatggctggcctgcca
gtttccttcagatatgagttcctgatggcagagacaatattctcacagctgctgatgtta
ccacagccgcctttcaaaccggtgtattacacactggttattattgatctttgcaaggca
cttcctggagcttttcctgcagttgtagcaggagctgtccgtgctctctttgagaagatt
gttgatttggatatggagtgtcggacacgcctaatcctttggttctcacaccatttatca
aactttcagttcatctggccatgggaagagtgggcttttgtcttagaccttccgaggtgg
gcccctcaacgtgtctttgttcaggaggttttggagagagaagttcgcttgtcatactgg
gagaaagttaagcagagcattgaaaatgcacctggtttagaagagttgcttcctccaaag
ggtggaacaaacttcagttttggtgctgaagatgataaagaaaacaatgaacttgtactg
tctggagagctcaataacatggttaaagggaaggttcctgtccgtgaaataatctcatgg
attgatgaaagtgtgtttccaaataatggtctagaagttactctcagagtggtcgtacaa
actcttcttaatattggatccaaaagtttcactcatttaataactgtgttagagagatac
gggcaagtcattgcaaaagtatgtcctgatgaggataagcaagtcatgctgatagctgaa
gtgagttctttctggaaaagtaacacccaaatgacagcaatagcaattgacaggatgatg
ggctaccgacttgtatcaaatctagctattgtgagatgggtcttctcagcagaaaataca
gagctatttcacacatcagatcgtccatgggaggttcttagaaatgcagtcagcaagaca
tacaatcgtaattctgatctaagaaaggagatattggctcttaaaaagaatatttcatca
gctgaagaaattgccaaggaggcaaaagcagagttagatgctgcagagtcaaaactcaca
ctggtggatagtgaaccggttcttggtgaaaaccctgttaggttgaatagattgaaatta
cgtgctgaaaaatcaaaggaggaggtggtgtctcttcaagaatctttagaagctaaggaa
gctcttcttgcacgagctgctggtgaaaatgaggcattgtttgtcttgttgtacaaaagc
ttctcaaatgtattgaaggagcgtcttccgaagggatcggaagctagaacactgcgtgaa
ttgaagtctgtacaagttgatgagatggcagtggaccctgaagaaccatcatcaatggaa
ttagacaatgagaaccagaaacctgaagacagtcagtcaaatggtgggaagaaaagtaat
gcttataatataggtgaaaaggagcagtggtgtatcactactttgggctacgtgaaggcc
ttttccagacagtacgcttctgagatatggccccttatcgaaaagttggatgcagaggtg
atgacagaagaggtaccccctcttttccggtcagctgtttattctgctcttcgaagacca
attaatgacgcttga
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