Lotus japonicus: 130729904
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Entry
130729904 CDS
T04348
Name
(RefSeq) uncharacterized protein LOC130729904
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
lja
Lotus japonicus
Pathway
lja03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130729904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lja03009
]
130729904
Ribosome biogenesis [BR:
lja03009
]
Eukaryotic type
Pre-60S particles
GTPases
130729904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EF-G_D2
GTP_EFTU_D2
EFG_III
SRPRB
RNase_3_N
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
130729904
NCBI-ProteinID:
XP_057437741
LinkDB
All DBs
Position
1:complement(120265375..120268837)
Genome browser
AA seq
1023 aa
AA seq
DB search
MEEEEVNSRHKIRNICILAHVDHGKTTLADQLIAVASGGMVHPKVAGRVRFMDYLDEEQR
RAITMKSSSIALRYNHHTVNLIDSPGHIDFCGEVSTAARLSDGALLLVDAVEGVHIQTHA
VLRQCWIEKLSPCLVLNKIDRLITELKLTPSEAYSRLLRIVHEVNGILSAYKSEKYLSDV
DSLIASSSSAASGGEFVEDDDNEDVFQPQKGNVVFACALDGWGFGVHEFAEFYASKLGAS
VGALQKALWGPRYFNPKTKMIVGKKGIGGGGGKAKPMFVQFVLEPLWQVYQGALEGDGEL
VGKVIKAFNLQVPARELQHRDPKVVLQAVMSRWLPLSDAILSMVVKCMPDPVAAQAFRIS
RLIPEREVAAGDGVDPRVVEEAKLVRKSVEGCDWGPEVPCVAFVAKMFAVPLKMIPLQGG
EIVSDEGEGDSDECFLAFARIFSGVLSVGQRVFVLSALYDPLKGESMQKHIQEAELKSMY
LMMGQGLKVVTSAKAGDVVAIRGLGQHILKSATLSSTRNCLPFSSMAFQVAPTLRVAIEP
SDPAEMGLLLKGLRLLNRADPFVEVTVSGRGEHVLAAAGEVHLERCIKDLKERFAKISLE
VSPPLVSYKETIEGEVSNVMENLKALSRSSDYVEKTTPNGRCIIRVQVMKLLPSLTKVLD
ESSDLLGDVIGIKSGQTVKNMETRRPSILEDDNSAEVLKKRIIDAVESDILSRNENDKDH
ADKCKLKWLKLLSRIWALGPRQIGANILFTPDIKAESTDNSVLLRGCSHVSERLGFVADS
SNSNSVSETSLDDNEAWYMDAERLESSVITGFQLATSAGPLCDEPMWGLAFVVEARISPF
TGQYDESETHQQSEQYGIFAGQVITTVKDACRAAVLQNKPRLVEAMYFCELNTSTEYLGP
MYAVLSRRRARVLKEEMQEGSSIFTVHAYVPVSESFGFADELRRWTSGAASALLVLSHWE
ALPEDPFFVPKTEEEIEEFGDGSSVPPNTARKLMNAVRRCKGLPVEEKVVQHGTKQRTRA
RKV
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaagaagtgaattcgaggcacaaaatccgcaacatctgcatcctcgcacat
gtggaccacggcaagaccactctcgccgatcagctcatcgccgtcgcgagcggcggcatg
gtccaccccaaggtagcgggtcgggtccgcttcatggactaccttgacgaggaacagcgc
cgagccatcaccatgaaaagctcctccatcgccctccgctacaaccaccacaccgtcaac
ctcatcgactcccctggccatatcgacttctgcggcgaggtatccaccgccgcgcgtctc
tccgacggcgcactcctcctcgttgacgccgtcgagggcgtccacatccagacccacgcc
gttctccgccagtgctggatcgagaaactctcgccttgccttgttctcaacaagattgat
cggttaatcaccgagctcaagcttactccctctgaggcttactctcggttgttgaggatt
gttcatgaagttaacggtatcctcagtgcgtataaatccgagaagtacctctccgatgtt
gactccctcattgccagcagcagcagtgccgcctccggcggcgagtttgtcgaggatgac
gacaatgaagacgtatttcagccacagaaggggaatgtggtgttcgcgtgcgcgctggat
ggttggggttttggggttcatgagtttgcggagttctatgcgtctaagcttggggctagt
gtgggggcattgcagaaagcgttgtgggggccgaggtatttcaatccgaagacgaagatg
attgttgggaagaaagggattggtggtggtggtggtaaggctaagcctatgtttgttcag
tttgtgttggagcccttgtggcaagtttaccagggtgctcttgagggggatggagagttg
gttggtaaggttataaaggcctttaatttgcaggttccggcgagagagttgcagcatagg
gatcctaaggttgtgcttcaggcggttatgagccgttggcttcctctctcggatgccatt
ttgtcaatggtggttaagtgtatgccagaccctgtggccgcacaggcatttaggatttca
cggctgattcctgagcgtgaggtggctgctggggatggggttgacccgagggtggtggag
gaggcgaagctcgtgaggaaatctgtggaggggtgtgattggggacctgaggttccttgt
gttgcctttgtggccaagatgtttgctgtccctcttaaaatgattcctctccaaggtggg
gagattgtgagtgatgaaggagagggtgattctgatgagtgtttcttggcgtttgctagg
atcttcagtggggttttgtctgtggggcagagagtttttgtgctttctgctttgtatgac
cccctaaaaggggagtcaatgcaaaaacatattcaggaggctgaattgaaatccatgtat
ctgatgatgggacaagggttgaaagtagtgacatcggccaaagcaggggatgttgttgct
attcgaggccttggccagcatatattgaaaagtgctaccctttcttctactaggaactgt
ttgcctttttcaagtatggcattccaagttgccccaacattgagagttgcaattgagcca
tctgaccctgcagaaatgggtttgctgctcaaaggattgagacttctgaatcgagctgat
ccgtttgttgaggtcacagtgtctggaagaggagagcatgttctcgctgcagctggtgaa
gttcatctagagagatgcataaaggacttgaaggagagatttgccaaaataagcttggaa
gtctcaccgccccttgtgtcctacaaagagaccattgagggagaggtgtccaatgtaatg
gaaaatttgaaggctcttagtaggagctcagactatgttgagaaaacaacccccaatgga
agatgtattattcgtgtgcaggtgatgaaacttttaccttcgcttacaaaggtgcttgac
gaaagctctgatttacttggagatgtcattggaataaagtccggacagacagtaaaaaat
atggagacccgaagacctagtattcttgaggatgataattcagctgaagtgctaaagaaa
cgcataatagatgcagtagagagtgatatattgagtaggaatgagaatgacaaggaccat
gccgataaatgtaaattgaagtggctaaaacttttgagtaggatatgggcccttggacca
aggcagattggtgctaacattctcttcactcctgatattaaagcagaaagtactgataac
tctgttctcttacgaggttgttctcatgtatctgaaaggttgggctttgtggcagattct
agtaacagtaactcagtttctgagacatctttagatgacaacgaagcttggtacatggat
gctgagcgtcttgagagtagtgttataactgggttccaactagccacttcagctggaccc
ttgtgtgatgaacctatgtggggtttggcatttgttgttgaggcacgtatatctccattt
acagggcagtatgatgaatctgaaacacaccagcaatctgagcagtatggcatctttgcg
gggcaggtaattacaactgtcaaagatgcttgtagagcagctgtacttcagaataagcca
cggcttgtggaagcaatgtacttctgtgagttgaacacgtctactgaatatttgggtccc
atgtatgctgtgctttcccgaagacgggcccgcgttttgaaggaagagatgcaggaaggt
tcatctatcttcactgtgcatgcatatgttcctgtttctgagagctttggttttgcggat
gagcttagaaggtggacttctggtgctgcaagtgcacttcttgtccttagccactgggaa
gcactacctgaagatcctttctttgtacccaaaacagaagaggaaattgaagagtttgga
gatggttctagtgttcctccaaatactgcgagaaagttaatgaacgcagtcagacgatgt
aagggccttccagtagaggagaaggtagtacagcatggaaccaagcagaggacacgggct
cgtaaagtctga
DBGET
integrated database retrieval system
