Lotus japonicus: 130730195
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Entry
130730195 CDS
T04348
Name
(RefSeq) replication protein A 14 kDa subunit B
KO
K10740
replication factor A3
Organism
lja
Lotus japonicus
Pathway
lja03030
DNA replication
lja03420
Nucleotide excision repair
lja03430
Mismatch repair
lja03440
Homologous recombination
lja03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130730195
03420 Nucleotide excision repair
130730195
03430 Mismatch repair
130730195
03440 Homologous recombination
130730195
03460 Fanconi anemia pathway
130730195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lja03032
]
130730195
03400 DNA repair and recombination proteins [BR:
lja03400
]
130730195
DNA replication proteins [BR:
lja03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
130730195
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
130730195
MMR (mismatch excision repair)
130730195
DSBR (double strand breaks repair)
HR (homologous recombination)
130730195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_3
Motif
Other DBs
NCBI-GeneID:
130730195
NCBI-ProteinID:
XP_057438123
UniProt:
I3SDU0
LinkDB
All DBs
Position
1:124240311..124241279
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AA seq
107 aa
AA seq
DB search
MDTSNPAVFVNAELLQFHVGRRVRAVMQVVRSDGAVVIGKSTDDKQLVVKGSPPPAPLTT
FVEVIGIVDSDKSIRAEMWTNFGDSIDMVSYQKLCQLANGEFKHLFL
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atggatacatcgaatcctgcagtctttgtcaatgcagaactgttgcagttccatgttgga
agaagggttcgtgcagtaatgcaggttgtgagatctgatggtgcagttgttattggaaaa
tcaactgatgacaagcagcttgttgtgaaaggatcaccaccacctgctcctctcacaact
tttgttgaagttattggtattgttgacagtgataagtccattcgcgccgagatgtggacc
aattttggtgattcaattgatatggtcagctaccagaagctttgtcagcttgcaaatggt
gaatttaagcacttgttcctgtga
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