KEGG   Lotus japonicus: 130730243
Entry
130730243         CDS       T04348                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
lja  Lotus japonicus
Pathway
lja03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130730243
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lja03041]
    130730243
Spliceosome [BR:lja03041]
 Complex A
  U2 snRNP components
   U2 related factors
    130730243
 Complex B
    130730243
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 zf-CCCH_DUS3L DNA_alkylation zf-CCCH_4
Other DBs
NCBI-GeneID: 130730243
NCBI-ProteinID: XP_057438177
LinkDB
Position
1:complement(124743141..124745640)
AA seq 318 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLVLSNMYQRPDMNLN
IITQPNQPQHQPQPLDPDKLQDHFDDFYEDLFQELSKYGQIQSLNICDNLADHMVGNVYV
QYKEEDHAANALMNLTGRFYSGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLK
KISRDLRRRLFGRNKRWNDRRGSRSRSRSRSPPRNRNYEERPQFGGRGGSGRRDFDRSHG
RHGRKPRSRSPPRFRGKRSRSPAGRDRSPVRESSAERRAKIEQWNREKEQDDTGPKNNTS
DDYDELAQNGSDSGNHQI
NT seq 957 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcatcgatcttcggaacagagaaagacagagtgaactgcccattc
tacttcaagatcggagcctgcagacacggcgaccgttgttctcgccttcacaccaagcct
accatctcccccaccctcgtcctctccaacatgtaccagaggcctgacatgaatctcaac
atcatcacgcagccgaatcagccgcagcatcagcctcagcctcttgaccctgacaagctt
caggatcattttgatgatttctatgaagatctgtttcaggagcttagcaagtatggccag
atccagagcttgaatatttgtgacaatttggctgatcacatggttggcaatgtatatgtt
cagtataaagaggaagatcatgctgctaatgctctgatgaatcttactggaagattttat
tcaggtcgacccatcattgccgacttttctcctgttacggattttcgagaagctacttgt
aggcagtatgaggaaaatgtatgcaatcgaggtggctactgcaacttcatgcacttaaag
aaaattagcagggatctgagaaggcggctctttggaagaaataagcggtggaatgatcgc
aggggaagtcggagccggagccgtagtcggagccctccgaggaatcggaactatgaggag
cgtccacagtttggtggtcgtggtggttctggtagaagagattttgacaggtctcatggc
cgccatggtaggaagcctagaagccgtagtcctcctcgatttagaggaaaaagaagtaga
agtcctgcaggcagggataggagccccgtcagagaaagtagtgcagaaaggagggctaaa
attgagcaatggaacagggagaaggaacaagatgacactggtcctaagaacaatactagc
gatgattatgatgaacttgcgcaaaatggtagtgattctggtaaccatcagatatag

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