Lotus japonicus: 130730313
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Entry
130730313 CDS
T04348
Name
(RefSeq) uncharacterized protein LOC130730313
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lja04121
]
130730313
Enzymes [BR:
lja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130730313
Ubiquitin system [BR:
lja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130730313
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
zf-C3HC4_2
zf-ANAPC11
zf-UDP
zf-C3HC4_4
zf-C3HC4
Beta-prop_SPT8
zf-C3HC4_3
WD40_2
zf-rbx1
WDR55
Beta-prop_EML_2
zf-RING_11
zf-RING_5
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
130730313
NCBI-ProteinID:
XP_057438266
LinkDB
All DBs
Position
1:125480249..125486769
Genome browser
AA seq
660 aa
AA seq
DB search
MASPSEFHRNEIAAAHLTAADFGLSDDDEEEEEEEEEEEDEEDDEEDEDEDYIPVAPSHR
VSPNVHQNPTSDSVEVILIPDSEQQNYSEEDGNKRRRIEEGEAPTSSLGSQGNELTGTDI
DGLVCPICMDAWTNNGEHHICCLPCGHVYGMSCINKWLQHRKSSGKCPQCKSKCSLKDVR
KLYASRLVAVDGNLHKRIRSLEDKCAGLESKDGQWNKKEAEWKKRVATLQSKDGNWHKKE
AEWKKRETVLYHEVQKLTERNTYLEQLLLLDVQNRQSEMMDGNMKPQRRYECERNWSPKS
HGKGSKFCGEEPFCNFEFREAFRVDGARLFDMDTSNDILLIARKPKAIGGEHLLTKMSLI
SPFEMEDIVLPSTTNAIRDLHISPSGNRLALYASLGKKLSVLSLDSSNIVVNYDLQIPAW
SCSWDLNSTNYIYAGLQNGSIMVFDLRQTSGPVKSLFGLSNKPVHTVQSLAQTLCLPSGA
RTILSASSGGICQWNIDSEAGPFVVPETDNQGVCISLAYCSSSDDIVGSYRPTFDMSMDV
SHSQPLLTPSQVIGQGVQGCHVLFKGMGSHHFQKTGSTHADVSKSLLPKCVIIDMENQSR
LFASRDEVTNDLVLYELPSFRVHQQFKMPAQSRDVRYSTSHWALGCLSENSVQLFHAKFS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtccgtcggaatttcaccgcaacgaaatcgccgccgcacatctcaccgccgca
gattttggactctccgacgacgatgaagaggaagaagaagaagaagaagaagaagaagac
gaagaggatgatgaagaagacgaagatgaagactacattcccgttgcaccgtcgcatagg
gtttctcccaacgttcaccagaaccctacctccgactccgttgaagtaatccttatccct
gattccgaacagcagaattactctgaagaggatgggaataaacgccggaggatcgaagaa
ggcgaggctcccacttcgtcactcggcagtcaagggaacgagctcaccggcaccgacatt
gacggcctcgtttgccctatttgcatggacgcttggaccaataacggcgaacatcatatc
tgttgtcttccttgtgggcatgtatatggcatgtcttgcatcaataaatggcttcaacat
cgaaaaagttccggcaagtgtcctcaatgtaaaagtaaatgctcgttgaaggatgtgagg
aaactctacgcttcgcgattagttgctgtagatggaaaccttcataagagaattaggtca
cttgaggacaaatgtgctggccttgaaagcaaggatggtcaatggaacaagaaagaagct
gaatggaagaagagagtagctacccttcaaagtaaggatggtaattggcacaagaaagaa
gctgaatggaagaagagagaaactgtattgtatcatgaagttcagaagctcacagagaga
aacacttatttggaacagctgctactactagatgtgcagaacaggcaatctgaaatgatg
gatggcaatatgaaacctcaacggagatatgaatgtgagcgcaactggagcccaaagtcc
catggaaaaggatcgaagttctgtggagaagaacctttttgcaattttgaatttcgggaa
gcattccgtgtggatggtgcacgcctatttgatatggacacttctaatgatattttatta
attgcacgaaagccaaaagcaattggtggagaacacttgctaaccaaaatgagcttgata
tctccatttgaaatggaagatatcgtactgccttccactacaaatgctattagagacctg
catatttctccttctggcaatagactggctctctatgcttcactagggaagaaattatca
gtgctcagcttggacagtagcaacattgttgtcaattatgatctacagattcctgcttgg
tcatgctcatgggatctcaacagtacgaattatatatatgcgggactacagaatggatct
attatggtgtttgatttgcgccaaacttcaggacctgtaaaatctttatttggcttgagt
aacaaacctgttcatacggtacaatctcttgcacaaactttatgtcttccttctggtgct
agaaccatcctatctgcatcttccggtggcatttgtcagtggaacattgattctgaagca
gggccgtttgtggttcctgaaactgacaatcaaggagtttgtatttctcttgcctattgt
tctagtagtgatgacattgttggttcataccgtccaacgtttgacatgtcgatggacgtg
tctcattctcaaccattactgactccttctcaagttattggacaaggagtacagggctgt
catgtcttgttcaagggaatgggcagtcatcatttccagaagacgggttccacacatgcg
gatgtgagtaaaagtctactacctaaatgtgtaattatagacatggagaatcagagtaga
ttgtttgcatctagagatgaagttacaaatgatttggtcttgtacgagttgccatctttt
agagttcatcagcaattcaaaatgccagctcagtcccgtgatgttaggtactcaactagc
cattgggcacttggttgtttaagtgagaactcagtacaacttttccatgccaaattctcg
taa
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