Lotus japonicus: 130730370
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Entry
130730370 CDS
T04348
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lja03009
]
130730370
Enzymes [BR:
lja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130730370
Ribosome biogenesis [BR:
lja03009
]
Eukaryotic type
90S particles
Helicases
130730370
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
UTP25_NTPase-like
Motif
Other DBs
NCBI-GeneID:
130730370
NCBI-ProteinID:
XP_057438348
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All DBs
Position
1:126099648..126104478
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AA seq
528 aa
AA seq
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MANDSLFAGIHFDRKKFGADIARFQKKENANDSVKIWSVTEDESEKTEDTVKERAPSVKK
RKRKRNSREETVEGFSVFRSSAHEPQLELNDEVQPDDDESIRLKKEKNRQLERDALFRKT
HNIHVSGYNVPSPLQNFDELKSRYNCPSYLLRNLAKLGFREPTPIQRQAIPVLLHGRECF
ACAPTGSGKTFAFVCPMLMKLKEPSRDCIRAVILCHTRELSAQTYRECKKLAKGKNFRIK
LLTKQLLRNADFSKFPCDILISTPLRLRMAIRRKKVDLSRVEYLVLDESDKLFEPDLFKQ
IDSVIKACSNPSIIRSLFSATLPDFVEDRARELMHDAVRVIVGRKNTASETIKQKLVFTG
SEEGKLLAIRQSFAESLNPPVLVFLQSKERAKELYGELAFDNIRVDVIHSDLSQEERENA
IDNFRAGKTWVLIATDVVARGMDFKAVNCVINYDFPDSASAYIHRIGRSGRAGRSGEAIT
FYTEEDIPFLRNVSNLMASSGCEVPSWLMELQKKKWRRHRPKRDSIST
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgactcgttgtttgccggcattcatttcgatagaaagaagttcggcgctgat
attgccaggttccagaaaaaagagaacgctaacgattcagtgaagatttggagcgtgact
gaagatgaaagtgagaaaacagaagatacagtcaaggagagagcaccgtctgtgaagaag
aggaagcgcaagagaaactctcgcgaagaaacggttgaagggtttagtgtgtttagaagt
tcagcacacgagccacagttggaattgaatgatgaagtccaacctgacgatgatgagtcc
attcgactgaagaaagaaaaaaatagacaacttgagcgggatgctctcttcaggaagaca
cataacattcatgtctctggttataatgtgccatccccacttcaaaactttgatgaattg
aaatcaagatataattgtccgtcatatttattgcgcaatctcgcaaaacttggatttaga
gaaccaacaccaatccaacggcaggctattccagtacttttacatggtcgtgaatgcttt
gcttgtgccccaactggttctggaaaaacctttgcttttgtgtgtcccatgcttatgaag
ctcaaggaaccttccagagattgcattcgggctgttatcctttgtcacacccgtgaatta
tctgctcaaacataccgagagtgcaaaaagcttgctaaagggaaaaattttcgtatcaag
ttattgacgaaacaacttctacgaaatgcagatttttcgaaatttccatgtgacatactt
atatccacaccacttcgattacgcatggctatccgaaggaaaaaggttgatctcagcaga
gttgagtatcttgtcttggatgaatccgataagttatttgaacctgacttgttcaagcag
attgattctgttattaaagcatgctcgaatccctcaataatacgctccctgttcagtgcc
actttacctgattttgttgaagatagagctcgagaactcatgcatgatgctgttcgggta
attgttggcaggaagaatacagcttctgaaacaataaagcaaaaattggtgtttactgga
agtgaagaaggaaaacttctggcaattcgtcaaagttttgcagagagtctaaatcctcca
gttttggtctttctccaaagcaaggaacgagccaaggagctgtatggtgaacttgcattt
gacaacattagagttgatgtcatccattctgatttgtctcaagaagagcgagaaaatgct
attgataacttcagagctggaaagacatgggttttgattgctactgacgtggttgcccgt
ggcatggatttcaaagctgtcaactgtgtgatcaattatgatttcccagattctgcttct
gcatatatccacagaattggtcgttctggcagagctgggaggagtggagaagcgattaca
ttttacaccgaggaagacattcccttcctgcggaatgtatctaatcttatggcttcatca
ggctgcgaagttccatcctggttaatggagttgcaaaaaaagaagtggaggagacatcgg
ccaaaaagagattcaatctctacctaa
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