Lotus japonicus: 130730385
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Entry
130730385 CDS
T04348
Name
(RefSeq) probable DNA helicase MCM8
KO
K10737
DNA helicase MCM8 [EC:
5.6.2.4
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lja03032
]
130730385
03400 DNA repair and recombination proteins [BR:
lja03400
]
130730385
Enzymes [BR:
lja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
130730385
DNA replication proteins [BR:
lja03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
130730385
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130730385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
WHD_MCM8
MCM_OB
MCM_lid
AAA_5
Mg_chelatase
AAA_3
Sigma54_activat
AAA_16
AAA
AAA_30
DUF4423
Motif
Other DBs
NCBI-GeneID:
130730385
NCBI-ProteinID:
XP_057438368
LinkDB
All DBs
Position
1:126137655..126147675
Genome browser
AA seq
809 aa
AA seq
DB search
MHITPEEPPQHQSSGTGHVCGSTSTDLYDSLDIYFPKQLFTVEETWLNLAADLHSFFSSP
TGQNIASQVKNDFGNYVLSLDFQQFKAMCHVEEFYEMLMEKPKIALSCMGAAVHQVLLSN
WENDKQELDGKVDIRLHNCPETMIALKNLKAAYIDKLVSVRGTAVKVSTVRPLVVEMSFE
CSKCKQVVTRIFPDGKFSPPSTCNLNGCKSKNFNPLRSTAKTIDFQKIRVQELLKHEDHE
EGRVPRTVECELTQDLVDSCIPGDVVTVTGIIRGISTYMDIGGGKSKNKNQGFYYLYLEA
ISIKNSKSQSIPEDAQDSNPKARPTELFDLFSFSSKDLEFVVKFADEHGSDLFRQILQSI
CPSIYGHELVKAGITLALFGGVRKNSMDQNKVPVRGDIHVIVVGDPGLGKSQLLQAAAAV
SPRGIYVCGNATTKAGLTVAVVKDAMTNDYAFEAGAMVLADSGLCCIDEFDKMSAEHQAL
LEAMEQQCVSIAKAGLVASLSSRTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLI
FILLDKPDELLDKRLSEHIMSLHSGHGQHSPALKKRRGDQPSDSRAAVSQNAEGVDFSVR
PGSLISKLKLDPRRDRDFVPLPGQLLRKYIAYARSFVFPRMTKPAADILQKFYLKLRDHN
TSADGTPITARQLESLVRLAEARARLDLRAEITVQDAMDVVEIMKESLYDKYVDENGVVD
FGRSGGMSQQKEAKRFLNALNKQSELEQKDCFSVSEIYSLADRISLKVPDIDTFIDNLNS
VGFLLKKGPKTYQVLSSSYSRSQSFRTRG
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcactccagaagagccgccgcagcaccagagttccggtaccggacatgtatgc
ggatccacctccacggatctatacgattcactggacatttacttccctaaacaactcttc
accgtcgaagaaacctggctcaacctcgccgctgatcttcactccttcttctcctctccg
acgggccaaaacatcgcttctcaggtgaaaaatgatttcggaaactatgtcctgtcactg
gactttcagcagttcaaagcaatgtgtcatgttgaggaattttatgaaatgttaatggag
aaaccgaaaattgctctctcatgtatgggcgctgccgttcaccaggttttgctttccaat
tgggagaacgacaagcaggagctcgatggaaaggtagatatccggcttcataactgtcct
gaaaccatgattgcactgaagaacttaaaagcagcttacatagacaagcttgtctcagtg
cgtggaactgctgtgaaagtcagcactgtgaggcctcttgtggtagaaatgagttttgaa
tgcagtaagtgtaaacaagtagttacgcgtatatttcctgatggaaaattttcacctcca
tcaacttgcaatttgaatggctgcaagagcaaaaatttcaatccattgcgatctactgcc
aaaaccattgattttcaaaaaataagagttcaagaattactaaagcatgaagatcatgaa
gaaggacgggtgcctcgaacagtggaatgtgagcttacccaagatcttgttgattcatgc
atacctggagacgtggtgactgttactggaattataagaggaattagcacttacatggat
attggtggaggaaaatcaaagaataaaaaccaaggattttactatctgtatcttgaagct
atatccattaaaaattcaaaatcacagtccatacctgaggatgcgcaagactctaatcca
aaagctaggccgactgagctgtttgatttgttttcgttttcttcaaaggatttagagttt
gttgtcaagtttgccgatgagcatggttcagatttatttcgacaaatccttcaatctatt
tgcccgtctatctatggacatgagctcgttaaagctgggataacactagcattatttggc
ggggtaagaaagaattctatggatcaaaacaaggttcctgtgcggggagatattcatgtc
atagttgttggtgatcctggtctaggtaagagtcagttgctacaagcagcagcagctgtt
tctccacgtggtatctatgtctgtggtaacgctacaaccaaagctggcctcacagtagct
gttgtgaaggatgccatgacaaatgactatgcttttgaggctggtgctatggttctggct
gatagtggattgtgctgtattgatgagtttgataaaatgtcagcagagcatcaggcttta
ctggaggctatggagcaacagtgtgtctctattgcaaaggcggggttagtagcaagtttg
tcatcccgaacgtctgtcttagcagctgcgaaccccgttggtggtcattacaaccgggca
aaaactgtaaatgaaaatttgaaaatgagtgctgctctcctctcccgttttgatttaatt
ttcatactgctggacaaacctgatgaacttctggacaagcgactttcggagcacattatg
tcacttcattctgggcatggacaacattcaccggcattgaaaaagcgacgtggagatcaa
ccttccgattctcgagctgcagtatcacagaatgctgaaggagtagattttagtgttaga
cctggttctttaatttccaagttaaaacttgacccacggagagaccgtgattttgttcca
ctacctggtcaactccttcgcaaatacattgcctatgcaaggagttttgtctttcctagg
atgaccaagccagcagcagatatcttacaaaagttttaccttaaactgagagatcataat
acttcggctgatggtactccaataacagcaaggcagctggaaagtctagtaaggctagct
gaagctcgagctcggctggacttgagagcagaaataactgtccaggatgcaatggatgtt
gttgaaatcatgaaggaatccttgtatgataaatatgttgatgaaaatggtgtcgtggat
tttggtcgaagtgggggtatgagtcaacagaaagaggcaaagcgctttctaaatgccctc
aacaagcaatcagaactagaacagaaagattgcttctcagtatctgaaatatacagtctg
gcagataggatttcgctgaaagttcccgatattgacactttcatcgataatttaaacagc
gttggtttcttactcaaaaaaggaccaaagacataccaggttttatcctcttcttattca
aggagccaatcgtttaggacaaggggctaa
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