Lotus japonicus: 130730543
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Entry
130730543 CDS
T04348
Name
(RefSeq) RING-H2 finger protein ATL16-like
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lja04121
]
130730543
Enzymes [BR:
lja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130730543
Ubiquitin system [BR:
lja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130730543
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_16
Prok-RING_4
zf-RING_4
zf-RING-like
Prok-RING_1
DUF2556
PHD
Motif
Other DBs
NCBI-GeneID:
130730543
NCBI-ProteinID:
XP_057438565
LinkDB
All DBs
Position
1:127859648..127860956
Genome browser
AA seq
322 aa
AA seq
DB search
MALNHNHSASDSALPIFAIVVLLATAFIVISYLTLVTKCCSNWHQINPLRWISNLLPQQN
EDPFIAFSPTRMWNQGLDESLIQEIPTFQFTKEQNGDQILQSVYGCVVCLTEFQEQDMLK
ILPNCSHAFHLDCIDIWLQSNSNCPLCRSSISANTHCAIPMDQIIAPTSSPQDSQLLSNM
GSEEDFVVIELGGGENGGTVIERNDSRESLAHSSRSHSSRKMMVQLKPRKCHHVSIMGDE
CIDVRKKDEQFCIQPIRRSFSMDSANDRQVYLDVQAMVQENRHQNDEACASEGRSGRFRR
SFFPFRYGWGSKNVVLPLENGV
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcactaaaccacaaccactctgcttcagactctgccttacccatatttgccattgtt
gtgctcttggccactgctttcatagtcatcagctacttaactcttgtcaccaagtgttgc
tcgaattggcatcaaattaacccactgagatggatttccaacttgctgcctcaacaaaat
gaagaccccttcatagctttctctcccaccaggatgtggaaccaaggacttgatgaatct
ctcatccaagaaatcccaacatttcaattcacaaaagaacaaaatggtgatcaaattctt
caaagtgtctatggctgtgttgtttgtttaacagagttccaagaacaggacatgctaaaa
attcttcccaattgcagccatgcttttcatttggattgcattgacatttggcttcaaagc
aattccaattgccctctttgtaggtcaagcatctcagcaaacactcactgtgcaattcca
atggatcaaatcatagctccaacctcttctcctcaggattctcagctactttccaacatg
ggaagtgaagaagattttgtggtcattgaacttggtggaggagaaaatgggggaacagta
atagaaagaaatgactcaagggagagcctagcacatagtagtagaagtcattcctcaagg
aagatgatggtgcagttgaaaccaaggaagtgccaccatgtttccatcatgggagatgag
tgtattgatgttagaaaaaaagatgaacagttttgcattcaacctattcgaagatctttc
tcaatggactctgcaaatgatagacaagtttacttagatgttcaagccatggtacaagag
aatagacatcaaaatgatgaggcttgtgctagtgaaggtcgtagtggaagatttcgaaga
tcattctttccttttcgttatggatggggatcaaaaaatgttgtcctgcctcttgagaat
ggtgtttaa
DBGET
integrated database retrieval system
