KEGG T04348: 130730729

Lotus japonicus: 130730729

Entry

130730729         CDS       T04348

Name

(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1

K15711

SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]

Organism

lja Lotus japonicus

Brite

KEGG Orthology (KO) [BR:lja00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lja04121]
    130730729
   03400 DNA repair and recombination proteins [BR:lja03400]
    130730729
Enzymes [BR:lja01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     130730729
Ubiquitin system [BR:lja04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    130730729
DNA repair and recombination proteins [BR:lja03400]
Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    130730729

SSDB

Motif

Pfam:

SNF2-rel_dom zf-C3HC4 zf-C3HC4_3 zf-RING_2 zf-C3HC4_2 zf-RING_5 zf-RING_UBOX RING_XB3-XBAT31 zf-rbx1 zf-RING_4 Prok-RING_4 zf-ANAPC11 zf-C3HC4_4 zf-RING_11 zf-UDP zf-Nse

Other DBs

NCBI-GeneID:

130730729

NCBI-ProteinID:

XP_057438789

LinkDB

Position

1:complement(130075650..130084850)

AA seq 440 aa
MEKLALMPEKKGESSKRRESGGSRENNLGLGIDNIIQTKLLKHQEEALEWLLKRESSVES
PAFWTRSEPLRGGILNDSATLGKKLSLLSLIAHEKNKSVETKTTLVVSGYASLKNWLSEV
SQHVITGTLKVLNAEFGVCMDIDFHEKVNEYDLLLIHMGGLVRAMESIPTLEKVWWRTIV
DRAHTIEDMDFYASQAVIALKADRKWAVTGKPILNGSYNLLSVLSYLGFESSTICGQSLT
DLAASISLGRTKEILRLPSQNVEVRYVNFSSEERVLHDKLKHEADSLSGVPNNEDELQNL
MFRLIRMCRDSALCFSDSDSDIEDISKKPELQKALEDPDDCAICFTPPEDTLVTKCGHVF
CRRCILKHLKTNKKCCPACRKRIKKHCLFSAGDYPRPELGSSSKVSELKNLLMESRDESP
ATKSVVFSECLEVLRFLKSI

NT seq 1323 nt +upstreamnt +downstreamnt
atggaaaaactcgctctcatgcccgaaaagaagggagaatcaagcaagaggagagaaagt
ggaggctcaagagagaataacttgggcctaggcattgacaatatcattcaaacgaagttg
ctgaaacatcaagaggaagctcttgagtggctcttgaaacgcgagagttctgtggaatcc
ccagctttctggacaagaagtgaacctctgcggggtggaatcttgaacgattctgccact
ttgggtaagaagttgtcattgctttctttgattgcccatgagaagaacaaaagtgtggaa
accaagactacattggtagtgtcgggttatgcaagtttgaagaactggttatcagaagta
agccaacacgttatcacgggaacgcttaaggtacttaatgctgaatttggtgtttgtatg
gacattgacttccatgagaaagtcaatgaatacgatcttcttctgatccacatgggtggc
ttggtacgtgcaatggaaagcatccccaccttggagaaagtatggtggagaacaattgtg
gatagagcacacaccatcgaggatatggatttttatgcgagtcaagcagttattgcgtta
aaggctgaccggaaatgggctgttacaggaaagcctattctaaacgggtcctataatttg
ctctcggttctttcatatttgggattcgagtcatccacaatttgtggacaaagtcttacg
gatttggcagcctcgatttcattagggaggactaaagaaatcttacgactgccatcccag
aatgtcgaagttcgatatgttaacttttcttcagaagagcgtgtcttacatgataaactg
aaacatgaagctgattctctttccggagttcctaacaatgaggatgagctgcagaatttg
atgtttaggcttatccgaatgtgcagagactctgcactgtgtttttcagattcagattct
gatattgaagatatatctaagaaacctgagttgcagaaagcgttggaagatcctgatgat
tgtgctatttgttttactccaccagaggacacactagtcacaaagtgtggtcacgttttc
tgccggcgttgtattctcaagcatcttaaaactaataaaaaatgctgtccagcttgtcgg
aaacgtatcaaaaagcattgtctcttttcagcaggagactatccccgcccagaattaggg
tcatccagcaaagtctctgaacttaaaaatcttctcatggagtccagggatgaatctcca
gctactaagtctgttgtattttcagaatgtcttgaggtgcttagatttttgaagagcatc
taa

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