Lotus japonicus: 130730879
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Entry
130730879 CDS
T04348
Name
(RefSeq) RNA-binding protein BRN1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lja03041
]
130730879
Spliceosome [BR:
lja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130730879
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
BRAP2
RRM_5
RNA_bind
RBD_DEAH11
GHMP_kinases_C
Motif
Other DBs
NCBI-GeneID:
130730879
NCBI-ProteinID:
XP_057438998
LinkDB
All DBs
Position
1:complement(131761272..131766346)
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AA seq
440 aa
AA seq
DB search
MADAKEESSKSSTGGGGGEEEESVKLFVGQVPKHMTEDELLTMFKEFALVDEVNIIKDKA
TRASRGCCFVICPSRDEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLP
KNVSEVEVSALFSNYGTIKDLQILRGSQQTSKGCAFLKYETKDQALAALEAINGKHKMEG
SSVPLVVKWADTEKERQARRAQKAQSQASNVPHADSQHPSLFGAMPMGYVPPYNGYGYQA
PGSYGLMPYRMPPMQNQPGFHNMMPHMNHGNALRPDLGPSMNPRNYHVPPASYVSSYPAV
PGLQHPMAYHAGMISPRPMSSPPGSVSPAGGNSNSGTPSGPSKNSGGQVEGPPGANLFIY
HIPQEFGDQDLANAFQPFGRVISAKVFVDKATGVSKCFGFVSYDSPEAAQSAISMMNGYQ
LGGKKLKVQHKRDNKPGKPY
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcgaaggaagagagtagtaaatctagcaccggcggtggcggtggcgaggaa
gaggagagtgtgaaactgttcgtagggcaagtgccgaagcacatgacggaagatgaactg
ctcacaatgttcaaggagttcgccttggtcgatgaagtcaacatcatcaaggataaagcc
acacgcgcttctcgaggttgttgcttcgtgatttgtccttccagagatgaagctgataag
gcagtcaatgcgtgtcacaacaagaaaacgctacccggggcatctagtccgttgcaagtg
aagtatgcagatggcgagttggaaagattagaacacaagctcttcattggcatgcttcca
aaaaatgtttctgaagttgaagtatccgcacttttctccaattatggaactataaaagat
ttacagattttaagaggttctcagcaaacaagtaaaggttgtgcatttttgaagtatgaa
accaaagatcaggctcttgctgctttggaggcaatcaatggaaagcataaaatggaggga
tctagtgttcctttagttgtaaaatgggctgatactgaaaaggaaagacaagctcgaaga
gctcagaaagcgcagtcccaagcttctaatgtacctcatgctgattctcagcacccctca
ttgttcggagccatgcctatgggttatgttcctccttataacggatatggttatcaggct
cctggcagttatgggctcatgccataccggatgccaccaatgcaaaatcaacctggtttc
cataatatgatgcctcacatgaatcacgggaatgcattgcggcccgatcttggtcctagt
atgaaccctagaaattatcatgtgcccccggcaagttatgttagctcttatcctgctgtg
ccaggtctacaacatccaatggcgtatcatgcaggaatgattagtccaaggcctatgagt
agtcctcctggttctgtttcacctgctggtggaaatagcaactctggtacaccttcagga
ccaagtaaaaattccgggggtcaagttgaaggtccacctggtgccaatctatttatttat
cacatacctcaagaattcggagatcaagatcttgccaatgcttttcaaccatttggtaga
gttataagcgctaaagtttttgttgataaagcaaccggtgttagtaaatgttttgggttt
gttagctatgattcaccagaagctgctcaatccgccattagtatgatgaatggatatcaa
ctaggaggtaagaaattaaaggttcaacataagagggacaacaaaccgggtaaaccttac
tga
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