Lotus japonicus: 130730894
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Entry
130730894 CDS
T04348
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
lja
Lotus japonicus
Pathway
lja04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
130730894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lja04121
]
130730894
Ubiquitin system [BR:
lja04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130730894
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
DUF7885
LRR_NXF1-5
LRR_8
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
130730894
NCBI-ProteinID:
XP_057439016
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Position
1:131877124..131879621
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AA seq
396 aa
AA seq
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MKRMVCSFPEEVLEHVFSFIQVDTDRNAISLVCKSWYEIERWCRRKVFVGNCYAVSPMIV
IKRFPEVRSIALKGKPHFADFNLVPEGWGGYVCTWIAAMSRAFPWLEEIRLKRMVISDES
LELIAKSFKNFKVLVLTSCEGFTTDGLAAIAANCRNLRELDLQESEVEDLSGHWLSHFPD
SYTSLVSLNISCLSNEVSLSALERLLGRCPNMKTLRLNRAVPLDRLPNLLRQCPQLVELG
TGVYSAEMRPDVFSNLAAAFSGCKQLKSLSGFWDVLPSYLPAVYPVCSGLTSLNLSYATV
QSSDLVKLISQCPSLQRLWVLDFIEDAGLDVLAASCKDLRELRVFPSDPFGFEPNVALTE
RGLVSVSEGCPKLQSVLYFCRQSEMVFDRMIFIAHT
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaatggtgtgttcgttccctgaggaagtgctggagcacgtgttttcgttcatt
caggtcgacactgaccggaacgcaatctcgctggtgtgcaagtcgtggtacgagatcgaa
cggtggtgcaggaggaaagtcttcgtcgggaactgctacgcggtcagcccgatgattgtc
atcaagcgcttcccggaggtgagatccatcgcgctcaaagggaagccgcacttcgcggac
ttcaatttggttccggaaggttggggcggttacgtgtgcacgtggatcgcagccatgtca
cgtgcttttccttggcttgaggagatcaggctcaagaggatggtcatcagcgacgagagc
ttggagctcatcgctaaatccttcaagaacttcaaggtgctggttcttacctcgtgtgag
ggtttcactactgatggacttgctgccattgctgccaattgcaggaatttgagggagttg
gacttgcaggaaagtgaggtggaggaccttagtgggcattggctaagccatttccctgat
tcctacacatcattagtttcacttaacatctcttgtttaagcaatgaggtgagtttgtct
gcactagagcgcctgcttggtaggtgtcccaacatgaagacccttcgcctcaatcgtgct
gtgccgcttgacagattacccaacctacttcgccagtgtcctcagctggttgagttaggg
acaggagtctactcagctgagatgagaccagatgtgttctcaaacctggcagcagcattt
tctgggtgcaagcaattgaagagcttgtctggcttttgggacgtgctcccatcctacctt
ccagctgtttaccctgtctgctctgggctaacatcactaaacttgagttatgctactgtc
caaagctctgatcttgtcaagcttatcagtcaatgcccaagtttgcagcggttatgggtg
ctggatttcatagaagatgctggtcttgatgtccttgctgcttcatgcaaggatcttagg
gagctgagggtgtttccatctgatccatttggtttcgaaccaaatgttgcattgacagaa
aggggcctagtctctgtatctgaaggctgccccaagctccaatcagttttatatttttgt
cgtcaatcagagatggtctttgatagaatgatatttattgcgcacacataa
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