Lotus japonicus: 130731291
Help
Entry
130731291 CDS
T04348
Name
(RefSeq) protein CHROMATIN REMODELING 35-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
lja
Lotus japonicus
Pathway
lja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130731291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lja03400
]
130731291
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
130731291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
130731291
NCBI-ProteinID:
XP_057439511
LinkDB
All DBs
Position
1:135510855..135516472
Genome browser
AA seq
884 aa
AA seq
DB search
MEAAIDVLPPKRPASSGISPQGHKRLKLSSDSLPYSAHDKAVPEAPTNVEDFSNPFAISD
FLNRLESGKFGSVTKDIEALITRKMQVLGPFFAKFPKLVTQSLNVVVNHNEESNKLENKK
GTIMSHDKVVDLEEEHTKKDASAAQPVVIIDSDEEDDRDKNSSLPFNEVMFPNSLQSPAL
RMMGYRAPIAYHGESEDLKFEPTRAAKDKTQRDKGVYVGVQEEDEVDTEDDGLDDIWREM
SMAVECSKDASVNPPPEEEVEKEDDCDHSFVLKDDLGYVCRVCGVIDRGIETIFEFQYKV
KRSTRTYMADSWNAKAKVDVYGINIAEDDIMFTEISAHPRHMKQMKSHQIEGFNFLVRNL
VGDNPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARPLVVLPKGILSTWKKEFQTWQVE
DIPLYDLYTVKADSRSQQLEVLKQWVECKSILFLGYKQFSSIVCDNSTNSISISCQDILL
KVPSILILDEGHNPRNENTDMVQSLAKVKTPRKVVLSGTLYQNHVKEVFNILNLVRPKFL
KMETSRPIVKRIHSRVHISGKKSFYDLVEDTLQKDPDFKRKIAVIQDLREMTSKVLHYYK
GDFLDELPGLVDFTVLLKLTPRQKHETGKLKNISRKFKVSSMGSALYLHPRLIPVADKCG
ENSVSDQMVDDLIEKLDVKDGVKSKFFMNILNLCESSNEKLLVFSQYLLPLKYLERLVMK
WKGWSFGKEIFGISGESSSEQREWSMNKFNNSPDAKIFFGSIKACGEGISLVGASRVLIL
DVHLNPSVTRQAIGRAFRPGQTKKVFVYRLIAADSPEEDDHITCFKKELISKMWFEWNEY
CGDRAFQVETVSVNECGDELLETPMLGEDVNCWHSDSVDLDSKC
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagcaattgatgtgttaccacctaaacgccctgcctcaagtggaatttctcct
cagggacataaaagactgaaactatctagtgatagtctgccatactcagcacatgataaa
gctgtgccagaggcacctacaaatgttgaagacttcagcaatccatttgcaatctctgat
tttttaaatcgtttagaaagtggaaaatttggaagtgtcacaaaggacatagaggccctt
ataacccgaaaaatgcaagtactgggccctttctttgcaaagtttcctaaacttgttact
caatcattaaacgtggttgtgaaccacaatgaagaaagtaataagttggaaaataaaaaa
ggcaccatcatgtcacatgataaagtagtagatttggaagaggagcacactaagaaggat
gcttctgcagcacagcctgttgtgattattgattcggatgaggaagatgatagagacaaa
aattcttctcttccatttaatgaagtaatgtttccgaactcactccaatctcctgcattg
aggatgatggggtatcgtgctcccattgcttaccatggagaaagtgaagatctcaaattt
gagccaactcgggctgctaaagataaaactcagagagataaaggtgtttatgttggtgta
caggaggaagatgaggttgatactgaagatgatgggcttgatgatatttggagggaaatg
tcaatggccgtagaatgttcgaaggatgcttctgtgaatcctccgcccgaggaagaagtt
gaaaaagaagacgactgtgatcattcttttgttttaaaagatgatcttggttatgtttgt
cgtgtttgtggcgtcattgaccgaggaattgaaaccatatttgagttccagtacaaggtt
aaaaggagcacaagaacttacatggctgattcatggaatgccaaagcaaaagttgatgta
tatggaattaatattgctgaagatgacatcatgtttactgaaatttcagcacatcctagg
catatgaaacaaatgaagtctcatcaaattgaagggttcaattttctcgtcagaaacctt
gtaggtgacaatcctgggggctgcatcttggcccatgctccaggatctgggaagacattc
atgataatcagtttcatgcaaagttttctaggaaagtacccaaatgctagacctctggtg
gtgcttcccaagggaatactatctacttggaaaaaggagtttcagacatggcaagtggag
gacataccactttacgatctttacactgtgaaggcagacagtagatcacagcagttggaa
gttttgaaacaatgggtggaatgcaagagcatccttttcttggggtacaagcagttttct
tcaattgtctgtgataatagtactaacagcatatcaatatcttgccaagatatattgctt
aaggtaccttcaattctcattttagatgaaggacataatccgcggaatgagaatactgat
atggtgcagtcccttgcaaaggtaaaaacacctagaaaagttgtactgtcaggtaccttg
tatcaaaaccatgtgaaggaggtatttaatattttgaatctggttcggccaaagtttcta
aagatggaaacatctaggcctattgtcaagcgcattcacagtagagtacatatatcgggc
aagaaatctttctatgatttggtggaggacactttgcagaaggacccggattttaaaagg
aaaatagctgttattcaagatttgcgtgagatgacgagtaaggtacttcactattacaaa
ggagattttcttgatgagcttcctggtctggttgattttactgtgttgcttaagctgacc
ccaagacagaagcatgaaactgggaaattaaagaatatatctagaaagttcaaggtatct
tctatgggcagtgcgctgtatcttcaccctagattgatacctgttgcggataaatgtggt
gaaaactctgtatctgaccaaatggtggatgatttaattgagaagttggatgtgaaagat
ggagtgaagtcgaaattcttcatgaacattctaaacttgtgtgaatcatccaacgagaag
cttctggtgttcagccaatatctcttacctttgaaatatttagagaggttagttatgaaa
tggaaaggttggagttttgggaaagaaatcttcggaatctcaggggaatctagctctgag
caaagggagtggtccatgaacaaattcaacaattcacctgatgctaaaatcttctttggt
tcaatcaaggcttgtggagagggcatatctttggttggggcatcccgagtactcattttg
gatgttcatctgaacccgtcagttactcgtcaagctattggtcgtgcatttcgaccagga
cagacaaagaaggtctttgtgtaccgattgatagctgctgattctccagaagaggatgat
cacattacttgtttcaagaaggaattgatttcaaagatgtggtttgaatggaatgagtac
tgtggtgatagggccttccaagttgagacagttagtgtcaatgaatgtggtgatgagctc
cttgagactccaatgttaggagaagatgtaaactgttggcattcagattcagtggacttg
gatagcaaatgttga
DBGET
integrated database retrieval system
