Lotus japonicus: 130731311
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Entry
130731311 CDS
T04348
Name
(RefSeq) peroxisome biogenesis protein 12 isoform X1
KO
K13345
peroxin-12
Organism
lja
Lotus japonicus
Pathway
lja04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
130731311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lja04121
]
130731311
Ubiquitin system [BR:
lja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
130731311
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
zf-RING_2
NinF
Motif
Other DBs
NCBI-GeneID:
130731311
NCBI-ProteinID:
XP_057439537
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All DBs
Position
1:135702159..135705182
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AA seq
404 aa
AA seq
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MLFQVGGQGSRPTFFEMAAAEQLPASLRAALTYSIGVLALRRPFLHRFLDYEDESFAFLM
LLLESHSLRTTDASFSESLYGLRRRPANVTVDTSDNAAATTATASGLHRRQKVLSVVFLE
RWFCVCVCVCVCVFFQVVLPYLKSKLHTIYNREREARLQATLWGDDNEAGVGGFEQDSLV
STPTLDAHASIAARVRSRVQKFVGFCYPWLHASTEGMHFTYKMLYLLDATGFYSLALHVL
RVQVCRATGQELMDTSSRISKMRSRERERLRGPQWLKTLQGALLSCSYTVLDYAQTGLIA
AVFFFKMMEWWYQSAEERMSAPTVYPPPPPPPPPKVAKEGVPLPPDRAVCPLCLQKRVNP
SVISVSGFVFCYACVFKYISQYKRCPVTLMPSTVDQIRRLFHDV
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcaggtgggaggccaagggagccgcccaacgttcttcgagatggcggcggcg
gagcagcttccggccagcctccgcgccgcactcacatactcaatcggcgtgttagccttg
cgacgacccttcctccacagattcctagactacgaagacgaatccttcgccttcctcatg
ctcctcctcgaatctcacagtttacgaaccaccgatgcttctttctctgaatcgctgtat
ggacttcgaagaagaccagccaatgtcactgttgatactagcgataacgctgcagctacc
actgccactgcttctgggttacacaggcgccagaaagttctttctgttgtttttctggaa
cgttggttttgtgtttgtgtttgtgtttgtgtttgtgtgttttttcaggttgtgttgcca
tatttgaaatctaagttgcatacaatctacaacagagaaagggaagctaggcttcaggct
actctttggggagatgataatgaagctggagtaggaggttttgaacaggattcacttgtt
tccacaccaaccttggatgcccatgcctccattgccgcacgggtccgaagcagagttcag
aaatttgttggattttgctacccatggttgcatgctagcactgagggtatgcatttcact
tacaagatgttatacctgttggatgctactggattctactctctagcactgcatgtgctc
cgggttcaggtctgccgagctacagggcaagagctgatggatacctcttctagaatttca
aagatgcgtagccgtgaacgtgagagacttcgtggcccgcaatggttgaagacattgcaa
ggagcattactcagctgttcatacactgtacttgactatgcacaaaccggattgattgca
gcagtgttcttctttaaaatgatggaatggtggtaccagtctgctgaggagagaatgtca
gctccaacagtatatcctcctccccctccacctcctccaccaaaggtagcaaaagaaggg
gtaccgctacccccagacagagcagtttgccccttgtgtttgcagaagcgtgtaaatcca
tctgtaatttcagtttcagggttcgtcttctgctatgcttgtgtattcaagtatatttct
cagtataagcgctgcccagtgacgctgatgccttcaacagttgaccagataaggagactc
tttcatgatgtatag
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