Lotus japonicus: 130731342
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Entry
130731342 CDS
T04348
Name
(RefSeq) protein PIR
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130731342
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130731342
Factors involved in mRNA localization
Other mRNA localization factors
130731342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Motif
Other DBs
NCBI-GeneID:
130731342
NCBI-ProteinID:
XP_057439588
LinkDB
All DBs
Position
1:135988197..136002742
Genome browser
AA seq
1277 aa
AA seq
DB search
MAVPVEEAIAALSTFSLEDEQPEVQGPGVWVTTDRAATESPIEYSDVSAYRLSLSEDTKA
LNLLNALTLEGKEMASVLYTYRSCVKALPQLPDSMKQSQADLYLETYQVLDLEMSRLREI
QRWQASASSKLAADMQRFSRPERRINGPTISHLWSMLKLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSGQWQDTDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQALIV
FVVESLELDFALLFPERHILLRVLPVLVVLVTSSEKDSESLYKRVKINRLINIFKNEVVI
PAFPDLHLSPAAILKELSIYFPKFSSQTRLLTLPAPHELPPRDAQEYQRHYMIINHVGAI
RAEHDDFTIRFASAMNQLLLLKSTDGSDVDWSKEVKGNMYDMIVEGFQLLSRWTARIWEQ
CAWKFSRPCKDASPSFSDYEKVVRYNYTAEERKALVELVSNIKSVGSMVQRCDTLVADAL
WETIHSEVQDFVQNTLASMLRTTFRKKKDLSRILSDMRTLSADWMANTNKSESELQSSQH
GGEESKANIFYPRAVAPTAAQVHCLQFLIYEVVSGGNLRRPGGLFGNSGSEIPVNDLKQL
ETFFYKLGFFLHILDYSVTVATLTDLGFLWFREFYLESSRVIQFPIECSLPWMLVDCVLE
SPNSGLLESVLMPFDIYNDSAQQALVLLKQRFLYDEIEAEVDHCFDIFVSKLCETIFTYY
KSWAASELLDPSFLFASENAEKYAVQPMRFHMLLKMTRVKLLGRMINLRSLITERMNKVF
RENIEFLFDRFECQDLCAIVELEKLLDVLKHSHELLSRDISIDSFSLMLNEMQENISLVS
FSSRLASQIWSEMQNDFLPNFILCNTTQRFIRSSKTVPVQKPSIPSAKPSFYCGTQDLNS
AHQSFARLHSGFFGISHMFAIVQLLGSRSLPWLIRALLDHISNKITLLEPMITGLQESLP
KSIGLLPFDGGVTGCVRLVKEQLNWETKSELKAEVLHGIKEIGSVLYWMGLLDIVMRETD
TMNFMQTAPWLGLLPGADGQILTSQDGGDSPVVSIFKSTAAAMASYPGCQSPSSFHIMSK
QAEAADLLYKANLNTGSVLEYALAFTSAALDKYCSKWSAAPKTGFIDITISKDFYRIYSG
LQIGYLEESAQVSTNSHQRLGDSVAWGGCTIIYLLGQQLHFELFDFSYQILNIAEVEAAS
VVQTHKNTHLPVQGWETLLEAMKKARRLNNHVFSMLRARCPLEEKTACAIKQSGAPIHRI
KFDNTVSAFETLPQKGA
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcccgtcgaagaagccattgcagcactttccacattctcgctcgaggatgaa
caaccagaggtgcaaggacctggagtgtgggtcacaactgatagagctgcaactgagagt
ccaatagagtatagtgatgtttctgcgtaccgactatctttatccgaggacacgaaagct
ctcaatctgctgaatgcccttaccctagagggaaaggagatggcttcggtgctttacaca
tatcgcagttgtgtcaaagcacttcctcagcttcctgattctatgaagcaaagtcaagct
gacttatatttggaaacatatcaagttctggatttggaaatgagtcgcttgcgtgaaatt
cagcgatggcaagcatcagcttcctcaaaactagctgctgatatgcaacgtttttctagg
cctgagaggcgcataaatggccctacaatatctcatttgtggtctatgttgaagttgctt
gacgttttggtgcaacttgaccatcttaaaaatgctaaggcaagcatacctaatgacttt
tcatggtataaaaggactttcacacaagtcagtggtcagtggcaagacactgattcaatg
agggaggagttagatgatttacagattttcttgagcacaagatgggctattttgttgaat
ttgcatgttgagatgtttcgcgtgaacaatgtagaagacattcttcaagctcttatagtc
tttgttgttgagtctctagaattggacttcgcacttctctttccagagcgccacattctt
ttgcgggttttgcctgttcttgttgtcctcgtgacatcatcagagaaagatagtgagtct
ctgtacaagagggtgaaaatcaacagactgatcaatatttttaagaatgaagtagtcatt
cctgcatttccagatctgcatctgtctcctgctgcgatactgaaggaattatcaatatac
tttccaaaattttcttcccaaacccgccttctcactcttccagcacctcatgagcttcca
cctcgtgacgcacaagagtatcagagacattatatgatcatcaatcatgttggagccatc
cgtgctgagcatgatgatttcacaattcgttttgcttcagcgatgaatcagctgttattg
ttgaagtccactgatggttctgatgttgattggagcaaagaagtcaaggggaacatgtat
gatatgattgttgaaggatttcagctgttaagtagatggactgcacgcatctgggaacaa
tgtgcttggaaattttctcgaccatgcaaggatgcatccccatcattctctgactatgaa
aaggtagtaagatataactacactgcagaggaaaggaaagcactggttgaacttgtgagc
aacataaagagtgtcggatctatggtgcagcggtgtgatacactcgttgctgatgcttta
tgggaaacaatacattctgaggtccaagattttgttcaaaacacattagcttctatgttg
cggactacctttagaaagaagaaggacctttctaggattctttctgatatgaggaccctt
tcagctgattggatggctaatactaacaagtcagagtctgagttacagtcctcgcagcat
ggaggtgaagaaagcaaagcaaacatattttatccaagggcagttgctccaactgcggct
caggtgcactgcttgcagttcttaatatatgaggtagtttctggtggtaaccttaggaga
ccaggtggactgtttggcaatagtggctcagaaatcccagttaatgatttaaaacagctg
gagacatttttttacaagcttggttttttccttcatattttagactactcagtgactgtt
gcaacattgacagatcttggtttcttgtggtttagagaattttacttagagtcttcgcga
gtcattcagtttccaattgaatgctctcttccctggatgttggtggattgtgtacttgag
tcaccaaactctggtcttcttgagagtgttctgatgccattcgatatctataatgattca
gctcagcaagccttggttttgctgaagcaacggtttctgtatgatgaaattgaggctgag
gtggatcattgttttgacatatttgtttcaaaattgtgtgaaaccattttcacatattac
aaaagttgggcagcaagtgaattgcttgatccttcattcctctttgcctcagagaatgca
gaaaagtatgctgtgcagcctatgaggttccatatgctgctaaaaatgactagagtgaag
ctgcttggaaggatgattaatttgcgaagtttgatcactgaacggatgaacaaagttttc
cgagaaaatattgagtttctgtttgatcgttttgagtgtcaggatctgtgtgccattgtg
gaactagaaaagctgttggatgtcttaaagcattcccatgaattactgtcaagagatatt
tctatagactcttttagtctcatgttgaatgagatgcaagagaacatctctcttgtatca
ttttctagtcgactggcctcacagatctggtctgagatgcaaaatgattttttgccaaac
tttattctctgcaatactactcaacgttttatcagatcatcaaagactgttcctgttcaa
aagccatccataccctctgctaagcctagtttctattgtggtactcaagatttgaattct
gctcatcaaagttttgcacgactgcatagtggattctttggaatatcgcacatgtttgca
attgttcaacttttgggatcccgatcattaccttggcttattagagcccttcttgatcac
atatcaaacaagattactctgcttgaaccaatgatcactggattacaagaatccttgccg
aaatcaattggacttcttccctttgatggaggtgtgacaggttgtgtaagacttgtaaaa
gaacaacttaactgggagacaaaatcagagctgaaagctgaggttcttcatggcataaaa
gagattggaagtgtattgtactggatggggcttctagatattgtgatgagagaaacagat
actatgaatttcatgcaaactgctccttggctgggcttgcttcctggggcagatggacaa
atattgacttctcaagatggtggagacagccctgttgtcagtatctttaaatcaacagct
gctgcaatggcttcataccctggttgccaatccccttcatctttccacatcatgtcaaaa
caagcagaagctgcagatcttttgtataaagctaacctgaatactggaagtgtgctggag
tatgcacttgctttcacaagtgctgcactggataaatattgtagtaaatggagtgctgcg
cccaagacaggcttcattgacatcacaatttctaaagatttctatcgaatttacagcggt
ctccaaattggatacttggaagagtctgcccaagtgtcaacaaatagtcatcaaaggctg
ggagattcagttgcttggggtggatgcactataatttatttgcttgggcaacagctgcat
tttgagctctttgacttttcatatcagattctcaatattgcagaagtggaggctgcatct
gttgtgcaaacacacaagaacacgcacctccctgttcagggatgggaaaccttgttggaa
gcaatgaaaaaagctaggagattaaataatcatgtattctctatgcttagagcacgctgc
ccccttgaagaaaaaactgcctgtgctattaagcaaagtggtgctccaatacatcgtata
aaatttgataacacagtttcagcatttgaaacactgccacagaaaggtgcttaa
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