Lotus japonicus: 130731400
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Entry
130731400 CDS
T04348
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
lja
Lotus japonicus
Pathway
lja03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
130731400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lja03400
]
130731400
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
130731400
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Motif
Other DBs
NCBI-GeneID:
130731400
NCBI-ProteinID:
XP_057439671
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All DBs
Position
1:complement(136438466..136441200)
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AA seq
652 aa
AA seq
DB search
MEEGRGNAGKGTKARALIERATNSTAPEVDPRLLKAIKMVVRYSDSELRLATETLFELMK
RDHSQVRYLALLIIDELFMRSKLFRALVVENLDQLLSLSVGFRRNLPLPAPPAVASVLRS
KAIEFLEKWNVSFGVYYRQIRLGYDYLKNTLKLQFPNIQANAERIRQERRERERKSKEIL
LKKYELLKENLSSIKGGIMSTVDEIDQCLGILHSKEEFLSDDMLDDEECDEFRPLELQQI
RLEALKEGEKVYENSDNKVVFDALRELYKLLMTKHMVSIQEWISVLVRVEVADNRFRDAT
LKELIDIQNHLKSIKNKCEEAGCSLANTSKPDEEEDFWEDGNIVSIEASSSATNNKDKHL
DTASTSHKMNNDNLGPYTKVSNGSTVDSPLHGGKEVESNPLKLKLKAEAPVVRWGSHLDN
WGSDRVFMANQRGLELESHWGRVDNDAVIPADKIAELNVQAMPYEEKQIEIQPCRAPLRK
GRLCQRKDLKVCPFHGPIIPRDDEGRPLNQSPSDEKRMDLKTDLVDKLAKQAVKNVRDRD
KEVANKREIDNKLLKRAKLAKIREHNDAVLRDAALASTSRSAVLGEIEELTNEDKLSAKE
KKQSLASMLRKKVTSKDRIGQKLLSSRARGNADRKHVSLEDSKYREAFPNQW
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaggaaggggaaatgctggaaagggaacaaaggccagagctttgatagagagg
gctaccaattccaccgctccggaggtggatccccgcctcctcaaggccatcaagatggtg
gtccgttattctgattccgagctccgcctcgctaccgaaacccttttcgagctcatgaaa
cgcgaccactctcaggttaggtaccttgcacttttaataattgatgaactctttatgcgt
tcgaagctttttagggcactggttgttgagaacttggatcagttattaagtttgagtgtt
gggttccggcgaaatttgccgcttcctgccccaccggctgttgcgtctgttttgcgttca
aaggctattgagttcttggaaaagtggaatgtgtcttttggggtttattacagacagatc
agattaggttatgattacttgaagaatactcttaagcttcagtttcctaacatacaagct
aatgcagagcggattcggcaagagagaagggaaagggaaaggaagtcaaaagagatttta
ttgaaaaagtatgaattattgaaagagaatttatcttcaataaagggaggaataatgtct
acggtggatgagattgatcagtgtttgggcattttgcattcaaaagaggagtttctgtcg
gacgatatgttagatgatgaagaatgtgatgagttccgacctttggagctgcagcagatt
cgtcttgaagcattgaaagaaggggagaaagtttatgagaacagtgacaacaaggtagtt
ttcgatgcattgagggaactatacaaacttctcatgacaaagcatatggtttccattcaa
gagtggatttctgttcttgtaagagttgaagtagccgataatagattcagagatgccact
ttgaaggaactcatcgatatccagaatcatctcaaatcaattaaaaataaatgtgaagag
gctggttgttctcttgcaaacacatcaaaacctgatgaggaagaagatttttgggaggat
ggtaatattgtttctattgaagcctcgtccagtgcaaccaataacaaagataagcatctt
gacacggcatcaacctcccataaaatgaacaatgataatcttggtccatacactaaagta
tctaatgggtctactgttgatagcccacttcatggaggaaaagaagttgagtcaaaccct
ctgaagcttaaacttaaggctgaagctcctgtagtaagatggggttcccacttggataat
tggggttcagacagggtttttatggctaaccagcggggcttggagcttgaaagtcactgg
ggtagggtggacaatgatgcagttattccagcagataaaattgctgaattgaatgttcag
gcaatgccttatgaagaaaagcagattgagatccaaccatgccgtgctcctttgagaaaa
gggagactctgtcagcggaaagatctgaaagtttgcccatttcatggacctatcattcct
cgagatgatgaagggaggccactcaatcagagcccttcagatgagaagagaatggattta
aagactgatttagtagataagttagcaaaacaagcggtaaaaaatgttcgtgacagagac
aaagaggtggcaaataagagagaaattgataacaagttgctgaaacgtgctaaacttgct
aaaattcgggaacacaatgacgcagttttacgggatgctgctttggcttcaacttcaaga
tcagctgttcttggagaaattgaagagttaactaatgaagacaaactgtctgccaaagag
aagaaacaaagtcttgcatctatgctgcggaagaaagtaacttcaaaagatagaataggt
cagaaacttttgagttcgcgggcaaggggtaatgctgataggaagcatgtatctcttgag
gattccaaatacagagaggccttcccaaatcaatggtaa
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