Lotus japonicus: 130731419
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Entry
130731419 CDS
T04348
Name
(RefSeq) serine/arginine-rich splicing factor RS31-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
lja
Lotus japonicus
Pathway
lja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130731419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lja03041
]
130731419
Spliceosome [BR:
lja03041
]
Common components
Common spliceosomal components
SR proteins
130731419
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
SET_assoc
RNA_bind
RRM_3
RRM_fung
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
130731419
NCBI-ProteinID:
XP_057439692
LinkDB
All DBs
Position
1:complement(136581059..136583220)
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AA seq
256 aa
AA seq
DB search
MLGYGIHNLRSQFWIKTLKLQSSFSSSFNASKASCASALTYNAGFAFVYFEEERDAEDAI
RALDNFPFGYEKRRLSVEWARGERGRGRDGPRTNQKPTKTLFVINFDPIRTRVQDIERHF
EPYGKVVHVRIRRNFAFVQFETQEDATKALECTHMSKVLDRVVSVEYSLRDDDEKGDRYN
SPRRGGGYGRSRSPVYRRRSSPDYGRPRSPVYDRYNGPGYDKRRSPDYGRPRSPDLGRHR
SPEYGRYRSRSPIRRP
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcttggctatggcattcacaatctcagatctcaattttggattaaaacccttaaattg
caatcatcgttttcttcctcattcaacgcctctaaagcttcatgtgcatcagccctcaca
tataatgcaggttttgcatttgtttattttgaggaagagcgagatgctgaggatgcaatt
cgtgcacttgacaattttccatttggatatgaaaagcgaaggctttcagtggagtgggct
aggggtgaacgtggccgtggtcgagatggcccaaggacaaaccagaagcctacaaagacc
ttatttgtgattaattttgacccaattcgtactagagtccaagatatcgaaagacacttc
gagccttatgggaaggttgttcatgttcgaattcgtaggaactttgcatttgtgcaattt
gaaacacaagaagatgctactaaagctctcgagtgtactcatatgagtaaggtactggac
agagtggtctctgtggagtattctctcagggatgatgatgagaagggtgacagatataac
agtcctagaagaggagggggttatggaagatcgcgcagtccagtttatcgtaggcgatct
agccctgactatggacgtccacgcagccctgtgtatgacaggtacaatggaccgggctat
gacaaacgcaggagccctgattatggtaggcctaggagccctgatcttggcaggcacagg
agtcctgaatatggtagatatcgcagtcgctcaccgatccggaggccatga
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