Lotus japonicus: 130731925
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Entry
130731925 CDS
T04348
Name
(RefSeq) protein argonaute 1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130731925
03036 Chromosome and associated proteins [BR:
lja03036
]
130731925
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130731925
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
130731925
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
130731925
microRNA pathway
RISC loading complex
130731925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
PhoD_N
Motif
Other DBs
NCBI-GeneID:
130731925
NCBI-ProteinID:
XP_057440069
LinkDB
All DBs
Position
1:56522754..56529709
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AA seq
906 aa
AA seq
DB search
MDRKRRTEGPSGGESYEEVKSPSKKSASTSSTIEIPLRPGKGTLGTKCIVKANHFFLDLP
NKELYHYDVTITPEVTSNDVNRAIMKQLVRQYRDSLGNRLPAYDGRKSLYTAGSLPFTLE
EFQINLVEDDDDGAPRRRRRDNEFKVVIKFAAQADLHHLGLFLEGRQTDAPQEALQVLDI
VLRELPTNKYCPVGRSFFSPDIGRTQSLGDGLESWRGFYQSIRPTQMGLSLNIDISSTAF
IEALPVKDFVTKLLNWDVLRSRSPLSNGDRGKIKKALCGLKVEVTHRGNMRRKYRVCGLT
SQATGDLTFHVDERGTLKSVVDYFYKSYGYEIQHPHLPCLQVGNTQKPNYLPMEVCKIVH
GQRHTKRLNEKQITNLLKSTCQRPRQRENDIVQTLNRNAYHEDPYAKEFGIKISDKLAQV
EARVLPPPWLKYHDTGNEKECLPREGKWNMRNKKLAEGGAVNNWFCINFARNIQDRFAQS
FCYELAQMCRTSGMTFNREPVVPTRSAPPDQVGKVLRAQYQDAKNIIRGRDVDLLIVILP
DNNGSLYGDLKRICETDLGLVSQCCLSKNVLKRNRQQYLANVALKINVKVGGRNTVIVDA
LSKRIPFVSDKVTIVFGADVTHPHPGEESSPSIAAVVASQDWPEITKYAGLVCAQTHREE
IIQDLFKQWHDPVKGTSTGGMIKELLISFFRATNQRKPERIIFYRDGVSEGQHHQVLLFE
LDAIRKACASLEPEYQPHVTFVVVKKRHHTRLFARDHDDKSSVDASGNILPGTVVDSKIC
HPTEFDFYLCSHSGIQGTSRPAYYHVLWDENNFTADALQSFTYNLCYTYARCTRSVSIVP
PAYYAHLAAYRARFYMEPEALDSGTMTGDVARRRRMDGPSTSTPPPVVVRSLPAVKENVK
KVMFYC
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggacagaaagagaagaaccgaaggacctagtggtggtgaaagctatgaggaggtgaaa
agcccttctaagaagagtgcttctacttcatcaacaattgaaattcccctccgcccggga
aagggtacccttggcactaagtgcattgtgaaggctaaccatttcttcttggaccttcct
aacaaagaactatatcattatgatgtcactattactccagaagtgacttctaatgatgtg
aaccgtgctatcatgaagcagctggtgaggcagtaccgtgactctctgggaaacagactt
cctgcctatgatggcaggaagagcctctatacagcagggtcattgccgttcacattagaa
gagtttcaaatcaaccttgtagaggatgatgatgatggcgcaccgaggaggaggaggagg
gataatgagttcaaagtggtgataaaattcgctgctcaagcagatcttcaccacttggga
ctctttttggaaggaaggcaaactgacgctcctcaagaagctctccaagttcttgacatt
gttctgcgtgaactccctactaacaagtattgtccagtggggagatcatttttttcacct
gatattggtagaactcagtccttaggtgacggattggaaagttggcgtggtttctatcaa
agcattcgtcccactcaaatgggactgtcactcaacattgacatatcatcaaccgcattt
attgaggctttgccagtcaaagattttgtgactaaattgctcaactgggatgtcttacgc
tctcgtagtccattgtctaatggtgaccgcggcaagataaaaaaagcactttgtggtctc
aaagtggaagtaacacatcgtggaaacatgagaaggaaatatcgtgtctgtggtctgacc
tcacaggctactggagatttgacattccatgtggatgagaggggaacactcaagtctgtt
gttgactatttctataagtcatatggctatgaaattcaacatcctcacttgccttgtttg
caagtgggcaacacacagaagcctaactatttaccaatggaggtttgcaagatagtacat
ggccaacggcacacaaaacgccttaatgagaagcaaattactaatttgctaaaatccact
tgccaacgtcctagacaaagggagaacgatatagtgcagacccttaataggaatgcctat
catgaagatccttatgctaaagagtttggaatcaaaatcagtgacaagcttgctcaagtt
gaagctcgggtccttcctccaccttggctcaaatatcatgatactggtaatgaaaaggaa
tgtcttcctcgagaaggcaaatggaatatgaggaacaagaaattggccgagggtggggca
gtcaacaactggttctgcataaactttgcaaggaacattcaggatagatttgcccaaagc
ttttgctatgaactcgcccaaatgtgtaggacttcaggcatgacatttaatcgtgagccg
gtggttcctacacggagtgctccacccgatcaagttggcaaggttctgagagcccaatat
caagatgctaaaaacataattcggggaagggatgttgatttgctcattgttattttaccg
gataacaatggctctctttatggggatctcaaacgcatatgtgagaccgatcttgggctt
gtttcacaatgttgtttgagtaagaatgttctcaagaggaatcgacaacaatacttggca
aacgtagcattgaagattaatgtgaaggtcgggggaagaaacactgtcattgttgatgct
ctttcaaaaagaattccttttgtcagtgacaaggttacaattgtttttggggcggatgtc
actcatccgcaccctggagaggaatcaagtccatccatagcagctgttgttgcttctcaa
gattggcctgaaatcaccaagtatgctggtttggtttgtgcccaaacacatagagaggag
atcattcaagatcttttcaaacaatggcatgatccagtcaaaggaacatcaaccggtgga
atgatcaaggaacttcttatatctttctttagggctacaaatcaacgaaagcccgaacgc
atcatattttacagggatggtgtaagtgaaggacagcatcatcaagttttattgtttgag
cttgatgctatccgaaaggcttgtgcatcgcttgagcccgaatatcagcctcatgtaact
tttgttgtggttaagaagcgccatcacactaggctctttgctagggaccatgatgacaag
agttctgttgatgcgagtggcaatattttgcccggtaccgttgtggactccaaaatctgc
catccgacggagttcgatttctatctttgtagccattctggcatccagggaacaagtcgt
cctgcttattaccacgtcctatgggatgaaaacaatttcactgctgatgcattgcaaagc
tttacctacaacctgtgctatacctatgcaaggtgcacgcgatcagtatctattgtgccg
ccagcgtactatgcacatttggcagcataccgagcaaggttctatatggaacctgaagct
ttggacagtgggaccatgaccggtgatgttgctcgtcgtcgcagaatggatggaccaagt
acaagtactcctccacctgttgttgtgaggtcattacctgcagtgaaggagaatgttaag
aaagtgatgttttactgttag
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