Lotus japonicus: 130732842
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Entry
130732842 CDS
T04348
Name
(RefSeq) cryptochrome-1-like
KO
K12118
cryptochrome 1
Organism
lja
Lotus japonicus
Pathway
lja04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
130732842
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
130732842
NCBI-ProteinID:
XP_057440818
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Position
1:58416585..58421670
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AA seq
682 aa
AA seq
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MSGGGCSSIVWFRRDLRVEDNPALTAAVRAGAVVAVFVWAPEEEGQYHPGRVSRWWLKQS
LAHLDSSLRNLGTPLITKRSTDSVSSLLEVVESTGATQIFFNHLYDPLSLIRDHRAKEVL
TSQGITVRSFNADLLYEPWDVNDANGQPFTTFDAFWGRCLSMPYDPESPLLPPKRIIPGD
VSKCSCDALMFEDESEKASNALLARGWSPGWSNANKALTTFINGPLIEYSQNRRKADSAT
TSFLSPHLHFGEVSVKKVFHLVRIKQVLWANEGYCAGEESVNLFLKSIGLREYSRYISFN
HPYSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVS
SFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGCEFDRIDNPQFEGYKF
DPNGEYVRRWLPELARLPTEWIHHPWNAPEPVLQAAGIELGSNYPLPIVEIEAAKVRLEE
ALLEMWQLEAASRAAIENGTEEGLGDSSESVPLAFPQDVHMEESHEIVRNNPPPITRRYQ
DQMVPSMTSSLVRVEEEETSLDLRNTAEDSSRAEVPVNVTAQQNAVDTLNEGMLQTVHRN
TLQYNHTAMELRNAADDSTVDSSGSSRRERDGGIVPEWFPPASSYSEQFVGDENGIGSSS
SYLQRHPQSRQLVNWRRLPQTG
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggtggatgcagcagcatagtgtggttcaggagagatctgagggtggaggat
aacccggcgttgacggctgcagtgagagcaggtgcggtagtggcggttttcgtctgggcg
ccggaggaagagggtcaataccaccctggaagggtttctaggtggtggttgaagcagagt
ttagctcaccttgattcctctttgagaaatcttggtactccacttatcactaagagatcc
actgatagtgtttcttctttgttggaggttgttgagtccactggtgctactcaaatcttc
tttaaccatttatatgatcccctgtcacttatcagggatcaccgagcaaaagaggttctg
acttctcagggcataacagtacgttccttcaatgctgatttattatatgaaccatgggat
gtcaatgatgccaatggccaaccattcacaactttcgatgctttttggggaagatgtctt
agcatgccttatgatcccgagtcacctcttctcccacctaaaaggattattccaggtgat
gtatcaaagtgctcttgtgatgcgttgatgtttgaagatgaatcagagaaggcaagcaat
gcacttcttgctcgaggatggtcacctgggtggagcaatgctaacaaggcattgaccaca
ttcataaatggtccactgattgagtactctcaaaatcgcaggaaggcagacagtgccact
acatcatttctctcaccccatttgcattttggtgaggtgagtgtcaaaaaagtcttccat
cttgtccgcatcaaacaagttttgtgggccaatgaaggatactgtgctggtgaagaaagt
gtgaacttattccttaagtctattggtctcagagaatattcaagatatatcagtttcaac
cacccctacagccatgaaaggcctcttcttggccaccttaagttctttccttgggtagta
aatgaaggctattttaaggcatggagacaaggcagaacgggctacccattagtagatgct
ggaatgagagagttatgggcaactggttggctgcatgatcggatacgtgttgtcgtttct
agtttctttgtgaaggttctgcagcttccttggagatggggaatgaaatatttttgggat
accctcttggatgcagatcttgagagcgatgctcttggctggcagtacatatctggtact
ttacctgatggttgtgaatttgaccgtatagataatccacagtttgaaggttacaaattt
gacccaaatggagaatatgtacgccgctggcttccagaacttgctagattaccaactgag
tggatacatcatccatggaatgcaccagaaccagtgcttcaagctgctggaattgagctg
ggatcaaattatcctcttccaattgtggaaatagaggcagcaaaagtcagactagaagaa
gctctattagaaatgtggcaactcgaggcagcttcaagagctgcaattgaaaatggaact
gaggaaggacttggagactcctctgaatctgtccctcttgctttccctcaagacgtacat
atggaggaaagtcatgagattgttaggaacaacccccctcccattactcgacgctaccag
gaccagatggttccaagcatgacttcttccctggtgagagtggaagaggaagaaacttca
ttggatcttcgaaacacggcagaagatagcagcagagctgaagttccagtaaatgtaacc
gcacaacaaaatgcagtagacacattgaatgaagggatgttgcagactgttcataggaat
actctgcaatacaatcatactgcaatggagctgagaaatgcagctgacgattccacagta
gattcttcaggtagtagcaggagagaaagggacggaggcatagttccggaatggtttcca
ccagcttccagttactcagaacaatttgtaggagatgaaaatggtataggaagcagttca
tcttacttgcaaaggcatcctcagtctcgccaattggtgaattggaggcggttaccacag
actgggtga
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