Lotus japonicus: 130732900
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Entry
130732900 CDS
T04348
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
lja
Lotus japonicus
Pathway
lja03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130732900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130732900
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130732900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
130732900
NCBI-ProteinID:
XP_057440887
LinkDB
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Position
1:complement(1048843..1054359)
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AA seq
478 aa
AA seq
DB search
MQSDNGKLFIGGISWDTTEERLREYFSAYGEVVEAVIMKDRTTGRARGFGFVVFSDPAVA
DIVIKEKHNIDGRMVEAKKAVPRDDQTVLSRNSGSIHGSPGPGRTRKIFVGGLASTVTES
DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKR
AVPKELSPGPSRSPLGGYSYGLNRVNSFLNGFTQGYTPNTVGGYGLRMDGRFSPVAGGRS
GFAPLGSGYGMNLNFEPGLTAGFGGNANFNSNVSYGRGLNPYFVGSSNRYGSPVGYESSN
GGNNSFFSSVTRNLWGNGGLNYGTSSANSNAYIGSGSGSVGGNTFGNTGVNWGSSPISGH
GGGNNVSQNSGNLGYGGGDNSYGLGTGGYGRSSGTTLAPTSSYSASNGGVDGAFSDFYNN
NSVYGDPTWRSSNSERDGSGPFGYGLGGAASDVSAKSSPGYVGGYTVNKRQPNRGIAA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctgataatggaaaattatttattggtggaatatcgtgggacacaactgaagag
cgactccgggagtatttcagtgcttatggtgaggttgtggaagcagtgataatgaaggat
cggacgacgggtagagcccgtggatttggttttgttgttttctctgacccagccgttgcg
gacatagtcataaaagagaagcacaacattgatggaaggatggttgaggcgaagaaagct
gttcctagggatgatcagaccgtactgagtagaaacagtggcagcatccacggttctcct
ggtccaggtcgcacaagaaagatatttgttggaggtttagcatcaacagtgacagagagc
gatttcaagaagtacttcgatcagtttgggactataacagatgttgtagtgatgtatgat
cacaacactcagaggccaagaggctttggatttatcacttatgattctgaagaggctgtt
gacaaggtcttactgaagacatttcatgaattgaatggtaaaatggttgaggtcaagcga
gcagttcctaaggagttatcgccaggacctagccgcagtccacttggtggatacagctat
ggtctgaatagggtcaatagtttcttaaatggcttcactcagggttatactccaaatact
gttggaggctatggacttcggatggatggtagattcagtccagttgccggtggtcgaagt
ggatttgctccacttggatctggttatgggatgaatctgaattttgagcctggtttgact
gctggatttggggggaatgcaaatttcaacagcaatgttagctatggtcggggattgaat
ccctactttgttggaagttccaataggtatggcagtcctgttggatatgaaagtagtaat
ggaggaaacaattctttcttcagctctgtgactcgaaatttgtgggggaatggtggcctt
aattatggaacaagttctgcaaattccaatgcatacattggatctgggagtgggagtgtt
ggaggaaacacatttggcaatactggagtcaactggggttcttcaccaatatctgggcac
ggaggagggaacaatgtatcacagaatagtggcaaccttggatatggaggtggtgacaac
agttacggtttggggactggagggtacggaagaagcagtggtaccactcttgcaccaaca
tcttcatattctgcatcaaatggtggtgttgatggggctttttctgacttttacaataac
aattcagtctatggggaccccacttggcgatcttcaaattctgagcgagatggatctggc
ccctttggttatggacttggtggtgcagcttcagatgtttctgccaagagttcacctggt
tatgttggtggttatacagttaacaaaagacagccaaataggggaattgctgcatag
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