Lotus japonicus: 130733037
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Entry
130733037 CDS
T04348
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
lja
Lotus japonicus
Pathway
lja03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130733037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130733037
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130733037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
130733037
NCBI-ProteinID:
XP_057441065
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Position
1:2584653..2589021
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AA seq
482 aa
AA seq
DB search
MESDLGKLFIGGISWDTDEERLKEHFGKYGEVIEAVIMRDRATGRARGFGFVVFADPAVA
ERVIVDKHIIDGRTVEAKKAVPRDDQNTLNRQSGGVHGSPGTGRTKKIFVGGLPSTITES
DFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLFKTFHELNGKMVEVKR
AVPKELSPGPIRSPLIGSYNYGLNRASSYLNSYAQGFNMNPVGGLGVRMDGRFNLNPLTS
SRGGLTPFGFSGYGMGVNLDSGLNLNPSYGGTSNYGGSLGYGRISPFYNSNSSRYTTPIG
YSGGNVRSDSLMNSPSRNVWGNGDLNSTSNNQASPGGAYLGSGSGAFGVSIGNSGANWGQ
SVPNQGGGAASGYNAWNSAYEGGGSTIGLGGGGYGRNSPSVTQSSTFTAPTGGYEGSYGD
LYRNGSFYSDSTLRSGASEVDGSGSFGYGLGGIASDDLVKSSDDLIGNYNVASRQSNRGI
AA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggaatcggatcttggcaagctcttcattgggggaatttcctgggatactgatgaggaa
cgtctcaaagaacattttgggaaatatggggaggtgatagaggctgtgatcatgcgagat
cgcgccacaggccgtgctcgaggcttcggttttgttgtctttgctgatcctgctgttgct
gagagagtcattgtggataagcacataattgatggccgaactgttgaagccaagaaggct
gttcctcgggatgatcagaacaccttaaacagacagtccggtggcgtccatggatctccc
ggtaccggacgcaccaagaagatttttgttggaggcttgccatcaacaatcacagaaagt
gattttaagaactattttgatcagtttggtacaattaccgatgttgtagtaatgtatgac
cacaacacccagaggccaagaggttttggcttcatcacttatgattcagaagaagctgta
gacagagttctttttaagacatttcatgaactcaacggaaagatggttgaggtcaagcga
gcagttcccaaagagctttcccccggaccgattcggagcccattgataggatcatataac
tatggtttgaatagggccagtagctacctaaacagttatgcccagggctttaatatgaac
ccggttggaggcttgggagtcaggatggatggtaggtttaatcttaatccacttactagt
agtagaggcggattaaccccatttggcttcagtggttatggaatgggagtgaatttggac
tcaggattgaatttgaacccaagctatggaggaacttcaaattatgggggtagtctagga
tacggtcggataagtcctttctacaacagcaactcaagcagatataccactcctatcggc
tatagcgggggcaatgtgagaagtgattcgcttatgaactcgccttctcggaatgtttgg
ggaaatggggatctaaatagtacttccaataaccaagccagccctggtggtgcttacttg
ggatctggaagtggggcttttggagtttcgattggaaatagcggcgcgaattggggtcaa
tctgtcccaaaccagggtggaggagctgcttccggctataatgcttggaatagtgcttat
gaaggtggaggtagcaccattggattaggagggggagggtatggaaggaacagtccaagt
gtgactcaatcctcaacatttactgcaccaactggcggttatgaaggatcctatggggac
ttgtaccgcaatggttcattttacagcgactcaactttgcggtccggtgcttctgaagta
gatggctcaggctcatttggctatggacttggtggtatagcttcagatgatctagtaaag
agttcggatgatttgattggtaactacaatgtagcaagtagacaatctaatagaggtatt
gctgcttag
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