Lotus japonicus: 130733087
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Entry
130733087 CDS
T04348
Name
(RefSeq) uncharacterized protein LOC130733087 isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
lja
Lotus japonicus
Pathway
lja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130733087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
130733087
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
130733087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
130733087
NCBI-ProteinID:
XP_057441142
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Position
1:3169070..3175981
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AA seq
314 aa
AA seq
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MANLPQSLSITASTSSQPRNTAVKDRETVATERIVVQLILELSNPDHRENALHELSKKRE
VVQDLAPLIWNSFGTIAALLQEITSVYPVISPPTLSPAQSNRVCNALALLQYVASHRDTR
LLFLNAHLHLYLYPFLKTTSKAKPFEYLRLTSLGVIGALVKVEDVEIISFLLSTEIIPLC
LHTMEIGTVLSKTVSTFIIQRVLSHHVGKEYVFARPDRFFAIGQVLGKVVAFLVEQPSIR
LLKHVIRCYLLLSEHWRGVEALSSCLPEMFRDGTFSNLLREDPDLMRFLQQLLHKVNQVP
APQAGEGYNHMMVP
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggccaatttgccccaatcgctctcaatcaccgcctccacctcctctcagccgcgcaac
accgccgtcaaggatcgtgagacggtggcaacggaacgcattgtcgttcaactgattctc
gaactcagcaaccccgatcatcgtgaaaacgctcttcatgaactctccaagaagagggaa
gtggttcaggatctcgctccgctaatttggaattcttttggtaccattgccgcacttttg
caggaaataacttcagtataccctgttatttcaccaccaactctttctccagcacaatca
aatcgagtgtgcaatgcacttgctctacttcagtatgtggcatctcaccgtgatacaagg
ttgctattcctcaatgctcacttacatctatatctgtatcccttccttaagacaacaagc
aaggcaaagccatttgagtatttgcggcttaccagtcttggtgtcattggtgccttggtg
aaggttgaagacgtggaaattataagtttccttctttcaacggagataattcctctctgc
ctgcacaccatggaaatcggcactgtgttgtcaaaaacagtttcaacatttataattcaa
agagttctgtcacaccatgttggtaaggagtatgtttttgctaggccagaccgctttttt
gcaatcggtcaagttttggggaaagtggtggcatttcttgttgagcaaccttcaattcgt
cttttgaagcatgttatccgatgttatcttcttctgtcagaacattggaggggcgtcgaa
gcgttaagcagctgtcttcctgaaatgttcagagatggtactttcagtaatttgcttcga
gaggaccctgatctcatgaggtttctacaacagttgcttcacaaagttaatcaggttcct
gcaccacaagctggagaaggatacaatcacatgatggtaccctga
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