Lotus japonicus: 130733127
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Entry
130733127 CDS
T04348
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 32
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lja03009
]
130733127
Enzymes [BR:
lja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130733127
Ribosome biogenesis [BR:
lja03009
]
Eukaryotic type
90S particles
Helicases
130733127
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
130733127
NCBI-ProteinID:
XP_057441193
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All DBs
Position
1:4061832..4068451
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AA seq
748 aa
AA seq
DB search
MRRPKSKEFRKQQRLSEEEEIKLLDSWIQSQKPNSGSNPMSLPPLPKDAPVGRIDDTTFS
RYAGVNRFSHLPLSKKTIDGLRDAKFVAMTDIQRASLPHALCGRDVLGAAKTGSGKTLAF
IIPVLEKLHRERWGPEDGVGSIIISPTRELAGQLFDVLKAVGKYHGFSAGLLIGGRKDVN
MEKERVNELNILICTPGRLLQHMDETPNFDCSQMQVLVLDEADRILDSGFKKDLNAIISQ
LPKRRQTFLFSATQTKSIQDLARLSLKDPEYLSVHEESVTATPTLLKQIVMIVPLDQKLD
MLWSFIKTHLQSKTLVFLSSCKQVKFVFEAFKKLHPGIPLKCLHGRMKQERRMAIYSEFC
EKRSVLFSTDVAARGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYKSVGKSVLFLLPS
EVEMLERLKAAKVPVHLTKPRKELLQPVSGLLASLLIKYPDLQPRAQRAFVTYLRSIHIQ
KDKEIFDVLKLPIDEYSASLGLPMTPKVRFLNQKIKSKAVSTTSVLAEPEDSNKENDFVV
STNKLDTIALKDEETDDDLLRAADTSNEGDVKSSEITEIMPATRLLKKKKLKINVHRPLG
TRVVFDDEGNTLPPLARIADTHGGKESLLLDPEQKAEYYKRMRADLKKADKEDKLVERKR
LREKRMKQKMKLKAGNAEEEDSEVDNSGSEGDEAVDRRHKKSKIYFDSDSDGGERNEVTG
RGANISADSITLEEQEALALKLLNSMHS
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaccaaaatccaaggagtttcggaagcaacaacgtctctcagaagaggaagag
ataaagctcttggattcatggatccaatcccagaaaccaaactctggttccaacccaatg
tcactgcctccactccccaaagacgcccccgttggccgtatcgacgacaccacgttctcg
cgctacgccggcgtcaaccgcttcagccacttgcctctgtccaagaaaaccattgacggc
ttgcgtgatgctaagttcgttgccatgactgatatacagagagcttctcttccccacgcg
ctttgcggccgtgatgtgcttggcgccgccaaaactggctccggcaaaacgcttgctttc
atcattccggtgttggagaagctacatagagagagatggggacctgaggatggagttggc
agcattatcatatcccctacgagagaattagctggtcagttatttgatgtgttgaaggct
gttgggaagtaccatggttttagtgctggcctcctcattggcggtcgcaaggatgttaac
atggagaaagagcgtgtcaatgagctcaacatcttgatctgcacacctggtcgccttcta
cagcacatggatgaaactcccaactttgattgttcgcagatgcaggttttagtactagat
gaggctgatcgtattctcgacagtggattcaagaaggatctaaatgcaataatctcacag
ctgccaaaacgtagacaaacctttcttttctcagccactcaaacaaagtcgattcaagat
cttgcaagactaagtttgaaagacccagagtatctgagtgtgcacgaagagtctgtgact
gccactcctactctcttgaagcaaattgtgatgattgttcctctggatcagaagttagat
atgctgtggagtttcataaagacacatcttcagtcaaaaacacttgtctttctttcgagc
tgtaaacaggtaaaatttgtctttgaagcatttaagaaactgcaccctggcataccgctg
aagtgccttcatgggaggatgaagcaggaaagaagaatggcaatatattctgagttctgt
gagaagcgctcagttctcttctcaactgatgtggctgcgagaggccttgattttaataag
gcggttgactgggttgttcaggttgattgtcctgagaatgtagcatcttacatacataga
gttggccgtactgctcgttataaatccgttggaaagtcagttttgtttcttttgccttca
gaagttgaaatgcttgaaagattaaaagcagcaaaggttccagtgcatcttaccaagcca
aggaaagaactactgcaaccagtttctggtttgttggcatctttactgatcaagtatcct
gacctgcaacctcgggctcaaagggcatttgtcacatatttgagatccatccatatccaa
aaggataaagagatctttgatgttttgaaactacctattgacgagtattcagcatcatta
ggcttgccaatgactcccaaagtccgatttctaaaccagaaaattaagtctaaagcggtg
tcaacaacatcggttttagctgaaccagaagattcaaataaggaaaatgactttgtggtt
tcaacaaataagctagacacaattgctttgaaggatgaggaaactgatgatgatcttctt
cgggcagctgatacctcaaatgaaggcgatgtgaagtcatctgaaattacagaaataatg
ccagcaactcgtctattgaagaaaaagaagctcaagattaatgttcacagaccattgggc
actcgggttgtatttgatgatgaaggcaacacacttcctccgctagccaggattgctgac
acacatggtggcaaggaatcattgcttcttgacccagaacaaaaagctgaatactataaa
aggatgcgagcggatttaaagaaggcagacaaggaagacaaacttgtagagcgaaaacgg
ctaagagagaaaagaatgaagcagaagatgaagcttaaagcagggaatgcggaagaagag
gacagcgaagttgataattctgggtcagaaggagatgaagcagtagatagacggcataaa
aagagcaagatatactttgatagtgatagtgatgggggtgaaagaaatgaagtcacaggg
cgtggtgcaaatattagtgctgactccattactttggaggagcaagaagcgctggctttg
aagttgttaaattccatgcattcatag
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