Lotus japonicus: 130733240
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Entry
130733240 CDS
T04348
Name
(RefSeq) rRNA (cytosine-C(5))-methyltransferase NOP2C
KO
K21971
methyltransferase NSUN6 [EC:2.1.1.-]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lja03016
]
130733240
Transfer RNA biogenesis [BR:
lja03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
130733240
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
PUA
Methyltransf_31
FtsJ
RsmF-B_ferredox
Motif
Other DBs
NCBI-GeneID:
130733240
NCBI-ProteinID:
XP_057441350
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Position
1:5963791..5971374
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AA seq
610 aa
AA seq
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MKKGRDLLIATSRRTRTLPQPPSSPFQEAMQSSSSSSSPSSSSDRYSFNPTLQWNPQLHH
YFLKAYGSHRFSLISAALTRPSRYSCIRVNSLRSTTDAVIEKLRSLVNQQPPSNAEDEVV
NPLKDCDGSAAAPFSKCRIPGLDYVVFVWGSGPHRIDYGRDADAPPKEVIVSRKCAEAVL
RGAQVYVPGIVACSAHVEEGDTVAVSVAVEQQGSSGGWSAGMTRGTVLQGSQTDPYYTER
SGLYIGQGVAILSRAGMFRVPQGVGVDMKDRVYDLPSFHSVLEGDIFLQNLPSIIAAHAL
DPQMGERILDMCAAPGGKTTAIAILMKDKGEVIATDRSHNKVLDIQKLAAELGLSCIKAF
RLDAVKSVCQRNDIDTLTDPCCNNANNGVASQEFSSPHLQVERMQPLVTESLKTETQEEN
DNGEKANGRAYQSKADIRKNMRRARNGPGRNQSVGGQVDSSKGFSPGSFDRVLLDAPCSA
LGLRPRLFAGEETIESLRSHAKYQRKMFDQAVQLARPGGVIVYSTCTINPGENEALVRYA
LDKYKYLSLAPQHPRIGGPGLVGSFEFPDGYVDEWLRPGEEDLVQRFDPSSPLDTIGFFI
AKFAVGSKDT
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagggagggacttgcttatcgccaccagtcgcagaaccagaaccctccctcaa
ccaccatcttctccgtttcaagaagcaatgcaatcttcttcatcttcatcttcaccttca
tcttcttcagatcgatattccttcaacccaaccctgcaatggaaccctcaactccaccac
tacttcctcaaagcctatggctcccaccgcttctctctcatctccgccgctctaacgcgt
ccttctcgctactcctgtattcgcgtaaactccctcaggtcaacaaccgacgctgtcatc
gagaagctgcgctcgctcgtgaaccagcaaccgccgtcgaacgccgaggatgaggtggtg
aacccgttgaaggactgtgacggttctgctgctgctcctttttccaaatgccgcattcct
ggcctagattacgttgtgtttgtttggggttcgggaccgcaccggattgattacggccgt
gatgctgatgcacctcccaaggaggttattgttagtaggaagtgtgctgaggctgttctt
cgcggcgcgcaggtgtatgttcctggtatagtggcttgcagtgctcatgttgaggaaggg
gatacagttgcagtttcagttgctgtagagcagcagggtagtagtgggggatggagtgct
ggtatgacgcgtggtactgttctccaaggatcacagacagatccatattatactgaacga
agtgggctttatattggccaaggggttgcaatattgtcaagggctggaatgttccgagtt
cctcaaggagttggtgtggatatgaaggatagagtatatgaccttccttcttttcatagt
gtgcttgagggagacatatttcttcagaacctaccaagcattattgctgctcatgcttta
gatccccaaatgggtgagcgaatactagacatgtgtgctgcacctggagggaaaacaact
gcaatcgcaatacttatgaaagataaaggagaggtcattgcaactgatagatctcataac
aaggtgctggatattcagaaattggcagctgaactgggcttgagttgcataaaagcattt
agattagatgctgttaaatctgtttgccaaagaaatgatattgatactcttactgatccc
tgctgtaataatgcaaacaatggtgtggcaagtcaagagtttagttcgccccatttgcaa
gtagaaagaatgcaaccccttgttacagaaagtctaaaaactgagactcaggaggaaaat
gataacggtgaaaaggcaaatggaagagcttatcaaagcaaagctgacatccggaagaac
atgcgtagagcgagaaatggacctggaagaaatcagtccgttggtggtcaggttgatagt
tcaaaaggtttttctcctggcagttttgatagagttcttcttgatgctccctgttctgcc
cttggtctaaggcctcgattatttgctggagaggaaacaattgaatctttaagaagccat
gcaaaataccagagaaagatgtttgaccaggctgttcaattagctcggccaggtggagta
atagtctattccacttgtacgattaatcctggtgagaatgaggcgttagttcgatatgct
ttggataaatacaaatacctgtcattggcaccacagcacccaagaattggaggacctggt
ctagttggtagctttgaatttcctgatggatatgtagacgagtggttacgacctggtgag
gaagaccttgttcaaagatttgatccatcatctccccttgatacaattggatttttcatt
gctaaatttgctgtggggtctaaagacacctga
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