Lotus japonicus: 130733287
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Entry
130733287 CDS
T04348
Name
(RefSeq) protein CHROMATIN REMODELING 5
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lja03021
]
130733287
03036 Chromosome and associated proteins [BR:
lja03036
]
130733287
Transcription machinery [BR:
lja03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
130733287
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
130733287
SLIK complex
130733287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Chromo_MIT1
OAM_alpha
Sua5_yciO_yrdC
Motif
Other DBs
NCBI-GeneID:
130733287
NCBI-ProteinID:
XP_057441399
LinkDB
All DBs
Position
1:6587269..6606796
Genome browser
AA seq
1746 aa
AA seq
DB search
MALFRNFSNETVSHDVIEDKSQGQNADRVHRSLGNECLDATSSEKEFDMNMEAQYESDGE
PDGACRLQNEAAANDGDAIKKPNLQTTGGSKSATVRSWGSTFWKDCRPMHPQNGSESGQE
SKSGSDYQNADVSEDNSLDGRAGRLDSEDDDELKEAGNGTRGHSDVPAEEMLSDEYYEQD
GDEQSDSLHYGEIHKPTGMNSWPQRMAKSNRAMHRKSRISDDDDGDYEEEDAADEDDPAD
ADFEPATSGHAANKDKDWEGEGSDEDDDSDENLDVSDDDDSFYAKKPKGRLRGKVGKSIQ
STRDRKAFAPSSRQRRVKSSFEDNESTSEDPDSDSDDDFKNTKKRSIHVRKNNSRSSVTA
SFSTRNSEVRTSSRAVRKVSYVESDGSEEADEGKKKKVQKDEIEEDDGDSIEKVLWHQPK
GMAEDAQRNNRSTDPVLMSHLFDSDFDWNEMEFLIKWKGQSHLHCQWKSFAELQNLSGFK
KVLNYTKRIMEDIRHRKTITREEIEVNDVSKEMDLDIIKQNSQVERIIADRISKDISDNV
IPEYLVKWQGLSYAEATWEKDIDIAFAQHAIDEYKAREAAMSVQGKMVDFQRKKSKASLR
KLEQQPEWLKGGRLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQ
QIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFYNDKKPGKPIK
FNALLTTYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTP
LQNSVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFNEKELANLHMELRPHILRRVIKDV
EKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNHP
FLFESADHGYGGASGSNDNSKLERIVFSSGKLVILDKLLVRLHETKHRVLIFSQMVRLLD
ILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADT
VIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQ
KLNAEGKLEKKEAKKGGSYFDKNELSAILRFGAEELFKEERNDEESKKRLLSMDIDEILE
RAEKVEEKEAGGEQGDELLGAFKVANFSNDEDDASFWSRWIKPDAVYQAEEALVPRSARN
IKSYAEADPCERSNNKRKKKEPELPERVQKRRKAEYSAPVVPMIEGASAQVRSWSYGNLS
KRDALRFSRAVMKYGNENQVDLIVAEVGGAVEAAPPEAQVELFSALIDGCTEAVELGNLD
LKGPLLDFFGVPVKANDLLTRVQELQLLAKRISRYEDPIAQFRVLSYLKPSNWSKGCGWN
QIDDARLLLGIHYYGFGNWEKIRLDERLGLTKKIAPVELLHHETFLPRAPNLRDRANALL
EQELAVLGVKHTNNRVGRKPSKKEREQMNTSLLRGQEKKKAGSVKVDVQMRKNRFQKTQK
VEPIAKEEGEMSDNEEVYEQFKEVKWMEWCQDVMVEEMKTLKRLHRLQTTSANLPKEKVL
SKIRNYLQLLGRRIDQIVLEHEEEPYKQDRMTVRLWKYVSTFSHLSGERLHQIYSKLKKE
QEEAGVGPSHVNGSASVSFGRNGNPIHHHMERQRGLKNMTSYQLPESVSSNTGKSEAWKR
RRRAESEDHFQVPPQRSTSSGVQITDPNSLGILGAGPSDKRFVSEKPYRTQPGGVPLRQS
FSSGIN
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atggctttatttaggaacttttcaaatgaaacagtctcacatgatgtcatagaagataaa
agccaaggacagaatgctgatagagtccatagatcactaggtaatgaatgtctcgatgca
acttcgagtgagaaagaatttgatatgaacatggaggcacagtatgagagtgacggtgaa
ccagatggtgcctgtaggctacaaaatgaggctgcagccaatgatggagatgctattaaa
aaaccaaacttacagactactggtggtagtaaatccgctacggtccggagttggggttca
acattttggaaggactgccgaccaatgcatcctcaaaatggttctgaatctgggcaggaa
tcgaaaagtggatcggactatcaaaatgcagatgtgtctgaagataattcattggacgga
agagcaggaaggttagactctgaagatgatgacgaactgaaggaggcaggtaatggtaca
agaggtcattctgatgttcctgcggaagaaatgctatctgatgaatattatgagcaggat
ggggatgagcaaagtgactcattgcattatggtgagattcataagcccactgggatgaat
tcatggcctcaacggatggctaaatctaatagagctatgcatagaaaatctaggatttca
gatgatgatgatggtgactatgaagaggaagatgcagcagatgaagatgatcctgctgat
gctgattttgagcctgccacaagtggtcatgctgcaaacaaggataaagactgggaaggt
gaaggctcagatgaagatgatgatagtgacgaaaatcttgatgtctctgatgatgatgat
tctttttatgctaaaaaacctaaaggaaggctgcgaggtaaggttggaaaaagcatacaa
tctaccagagatcgcaaagcatttgctccatctagtagacaaagaagagttaaatcatcc
tttgaagacaatgagtcaacatcagaggatcctgacagtgatagtgatgacgatttcaaa
aacacaaaaaagagaagtattcatgtccgcaagaataatagtcgctcttctgtaaccgca
agtttttctactcgtaacagtgaggttcgcacttctagtagggcagttaggaaggtatca
tatgttgaaagcgatggaagtgaagaagccgatgaagggaagaagaaaaaggttcaaaag
gatgaaattgaagaggatgatggtgactccattgaaaaggtactttggcatcagccgaag
ggcatggctgaagatgctcagaggaataataggtcaacagatcctgttttgatgagtcac
ttgtttgattctgactttgattggaatgagatggaatttttgattaaatggaaagggcag
tctcatttgcattgtcagtggaagtctttcgctgagctgcagaatctcagtggttttaag
aaggttttgaattatacaaagagaataatggaggacatcaggcaccggaaaacaatcaca
agagaggagattgaggtcaatgatgtgagtaaggagatggatttagatattatcaagcag
aacagccaggtggaacgaataattgcagataggatcagcaaagatatctctgacaatgtt
attccagaatacctggtcaagtggcagggactatcttatgctgaagcaacttgggaaaag
gacatcgatattgcttttgctcaacatgcaattgatgagtataaggctcgtgaggctgca
atgtcagttcaaggaaagatggtagatttccagcgtaagaagagcaaggcaagcttacgg
aagcttgagcaacaacctgaatggttaaagggtggaaggctccgtgattatcagcttgag
ggactgaattttcttgttaacagttggagaaatgatacaaatgtcattttagctgatgaa
atgggtcttgggaaaactgttcagtccgtatcgatgctcggttttctacagaatgctcag
cagatccatggtccttttcttgtggttgtgccattgtctactctatcaaactgggccaaa
gaattcaggaagtggcttcctgatatgaatatcattgtgtatgttggtactcgtgcaagt
cgagaggtgtgtcaacaatatgaattttataatgataaaaagcctggaaaaccaataaaa
ttcaatgcgctgttgactacatatgaagtagttttaaaggataaggctgttctctccaag
atcagatggaattatctgatggtagatgaggctcatagacttaaaaatagcgaggcgcag
ttgtatacaacgctttcggaatttagcaccaagaacaagttgcttatcacgggtactcct
ctacagaacagtgttgaagagctatgggctttgcttcacttccttgatcctgacaagttc
aagagcaaggatgattttgttcaaaactataagaatcttagttctttcaatgagaaagag
cttgcaaatcttcatatggaattgaggcctcatatacttagaagagttatcaaagatgtg
gagaaatcattaccccccaaaattgagcgtatccttagggttgaaatgtctcctcttcag
aaacagtattataagtggattttggaacgcaactttcataatttgaacaaaggagttcgt
gggaatcaggtttctctgctaaatattgtggtagaattgaagaagtgttgcaatcatccc
ttcctgtttgaaagtgctgaccatggctatggtggggcctcaggaagtaatgataatagt
aaactagagagaattgtctttagcagtggcaagctggtcatacttgataagcttcttgtt
agattgcatgaaaccaagcaccgtgttctaattttttctcagatggttaggttgttggat
atactaggagagtatatgtcacttcgagggtttcaatttcagaggcttgatggcagtact
aaggctgagctccgacagcaggcaatggatcatttcaatgcacctggtagtgatgatttt
tgcttccttctttcaacacgagctggaggtctgggtatcaaccttgccactgcagatact
gtcataatatttgactcagattggaatcctcaaaatgacctgcaggccatgagtagagct
catagaattgggcaacaagaagtggttaacatatatagatttgtgacaagcaaaagtgtt
gaggaagatattctggaacgcgctaagaagaagatggttctggaccacttggtgattcaa
aaattaaatgcagagggtaaactggagaagaaagaagccaaaaaaggaggaagttatttt
gataaaaatgagctgtctgcaatcttacggtttggagcagaggagctttttaaagaagaa
agaaacgatgaagaaagcaagaaacggctcttaagcatggatatagatgagattcttgaa
agagcagagaaggttgaagagaaggaagctggtggagagcaaggggatgagttattaggt
gcatttaaggttgccaatttttccaatgatgaagatgatgcaagtttctggagtcgttgg
attaagcctgatgctgtgtaccaagcagaggaagctcttgttccacgttctgcaagaaat
attaaaagttacgcggaggctgatccatgtgaaagaagtaataataaaagaaaaaagaag
gaacctgaactacctgaacgagttcagaaacggcggaaagcagagtattcagctcctgta
gtaccaatgatcgagggagcttctgcccaagtgagaagttggtcatatgggaatttatct
aaaagagatgcacttcgtttctctcgtgcagttatgaaatatggcaatgagaaccaagtc
gacttaattgttgctgaggttgggggtgcagttgaggcagctccacctgaagcacaggtt
gaacttttcagtgctctaattgatggctgtacagaagcggtggaacttggaaatctggat
ctaaaggggcctttgctggatttttttggcgtcccagtgaaggcaaatgatctactgacc
cgtgtccaagaacttcaactactagcaaagcgcattagtcggtatgaagatcccattgca
caattccgtgttttgtcatatctcaaaccttcaaattggtcgaaaggttgtggatggaat
caaattgatgatgcaagattgcttcttggaatacattactatggatttggtaattgggaa
aagattagattagatgaaaggcttggccttacgaaaaaaattgcacctgtagaacttcta
caccatgaaactttcttgccacgagctccaaatttgagagaccgtgctaacgccttgttg
gagcaagaacttgctgttcttggtgttaaacataccaataatagagttggacggaagcct
tccaagaaagagagagaacaaatgaacacctcactgttgcgagggcaggagaagaaaaaa
gcgggttctgttaaagttgatgtccaaatgagaaagaatagattccagaaaacccaaaag
gttgaacctattgcaaaagaggagggtgaaatgtccgacaatgaagaagtatatgagcag
ttcaaggaggtaaaatggatggaatggtgtcaggatgtgatggttgaagaaatgaaaact
ttgaaacgtcttcacaggttgcagacaactagtgccaatcttccaaaggaaaaggttctt
tcgaaaatacgcaactatttacagcttcttgggcgaaggatagatcaaattgtgttagaa
catgaagaggaaccgtataagcaagatagaatgactgtgcgactgtggaaatatgtctcc
actttctcccatctttctggggaaaggcttcatcaaatatattccaaacttaaaaaggag
caagaagaggctggggttggcccctctcatgtcaacgggtcagcatctgtttcattcggc
cgaaatggaaacccgatccatcaccatatggagaggcaaagaggtttaaaaaatatgact
agctaccaactgccagaatcagttagtagtaatacagggaaatctgaggcatggaaacga
agaagaagagcggaaagtgaggatcatttccaggttccacctcaaagatccacgagtagt
ggagtccagattactgatcctaactcacttggcatccttggtgctggaccatctgacaaa
cgctttgttagtgagaaaccttacaggacacaacccggtggggttcctttaagacaaagt
ttctcttcaggtataaactag
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integrated database retrieval system
