Lotus japonicus: 130733296
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Entry
130733296 CDS
T04348
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lja
Lotus japonicus
Pathway
lja00040
Pentose and glucuronate interconversions
lja01100
Metabolic pathways
Module
lja_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130733296
Enzymes [BR:
lja01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
130733296
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
130733296
NCBI-ProteinID:
XP_057441408
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All DBs
Position
1:complement(6740092..6744169)
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AA seq
446 aa
AA seq
DB search
MSPQTPIISFLIILTSLLLCNGYYIEEPLHETKYEQFGHYYNPVHEERLIKEKHEHFGHV
TRANNRATPLFSRPGGTVSVDDFGAKADGRDDTQAFKKAWNEACSTGAVLVVPEKRVYHL
KPITFSGPYQPNTAFMLHGTMEAWTQMSAYEGDRQHWIVFDSVTNFKVDGGGTFNGNGKN
WWQKSCKTNNNLPCNNEPRPTAVTFYHCNNLRVKNVRFKDAQQMHVTFQECFDVDVSNLV
IKAPGDSPNTDGIHVAKTQNIVIRNSVIGTGDDCISIVSGSRNVRATDITCGPGHGISIG
SLGADNSEAEVSNVMVNGATLRGTTNGVRIKTWQGGSGYAKNIKFLNIKMQNVTNPIIID
QNYCDQAEPCQEQDSSVKLSNVLYQNIIGTSASEVAIKFDCSRTVPCRGIYLQDVILEPE
GRGDTTASCENVRYVNRGKFFPRCSP
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtctccacaaacaccaattatctcatttctcatcatcctcacctcattactcttatgt
aacggttattacatagaggaaccacttcatgaaacaaaatatgaacaatttggtcactac
tacaaccctgtgcatgaggagaggttgatcaaagaaaagcatgaacattttggtcatgta
acaagggccaataatagagctacccctcttttttcaaggcctggtggaacagttagtgtt
gatgattttggagccaaagcagatggaagagatgatacccaggcatttaagaaggcatgg
aatgaagcatgttctactggggctgtccttgtggtacctgaaaaaagggtctatcatctt
aagccaatcactttttcaggcccataccaaccaaacactgcctttatgctccatgggaca
atggaggcatggactcaaatgtctgcatatgaaggagatagacaacactggatagtgttt
gacagtgtcacaaatttcaaagttgatggtggtggcactttcaatggaaatgggaaaaac
tggtggcaaaaatcctgcaaaaccaataacaaccttccatgcaataatgaaccaagacca
acggctgtgactttctatcattgcaacaacttgagagtgaagaatgtgaggttcaaagat
gcacaacaaatgcatgtaacctttcaggaatgcttcgatgttgatgtttccaatcttgtc
atcaaagcaccaggggatagccctaacactgatggaatccatgtcgcaaaaacacaaaat
attgtcataagaaacagtgtaattgggacaggtgatgattgtatttcaatagtcagtggg
tcaagaaatgttagagccacagatatcacatgtggacctggacatggaatcagcattgga
agcttaggagctgataactcagaagctgaagtttccaatgtgatggtgaatggagccacc
ctaagaggaacaactaatggggtgagaataaagacttggcagggaggttctggctatgca
aaaaacatcaaattcttgaacataaaaatgcaaaatgtaacaaatcccataatcatagat
cagaactactgtgatcaagcagagccatgccaagagcaggactcatcagtgaaattaagc
aatgtgttgtatcaaaacatcataggaacaagtgcttcagaagtggctatcaaatttgac
tgcagcagaactgttccttgcagaggaatctacctgcaggacgtgattttggaaccagaa
ggaaggggtgacaccactgcttcttgtgagaatgttagatatgtgaatagaggaaagttt
tttcctcgatgctctccttga
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