Lotus japonicus: 130733340
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Entry
130733340 CDS
T04348
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130733340
04121 Ubiquitin system [BR:
lja04121
]
130733340
Enzymes [BR:
lja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130733340
Membrane trafficking [BR:
lja04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
130733340
Ubiquitin system [BR:
lja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130733340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
CxC4
zf-RING_5
zf-ANAPC11
zf-Nse
zf-RING_16
DUF7410
Motif
Other DBs
NCBI-GeneID:
130733340
NCBI-ProteinID:
XP_057441466
LinkDB
All DBs
Position
1:complement(7534753..7542768)
Genome browser
AA seq
333 aa
AA seq
DB search
MSSGATHWCYECSQPIVPEGRDAICPYCDGGFVQELNELQGGVAPSQSGEFHQMPDLFDA
IHAFMGQRGSEPRFGLMDAVDNFMRHRMAGRHPNFDVRGRSGPAPAPPPEQSWGVYSSGP
YLIFHGQVPGFTFSNGGPRGAPRRAEFGDYFMGPGLEELIEQLTLNDRRGPPPAARSSID
AMPIIRITQAHLRSDSHCPVCKEKFELGSEAREMPCNHIYHSDCIVPWLVQHNSCPVCRV
ELPPQGHVSSRGGRSLGGRNVNSSTDGNDSSRGRENNNHQNQGRRNPLSFLWPFRSSSSS
SNNNRYAETRGSSSSNPPDQSNGTSYGGWPFDN
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtggagcaacacactggtgttatgaatgcagtcagccaattgtgcctgaaggg
agggatgccatttgcccttactgtgatggggggtttgtacaagaactcaatgagttgcaa
ggaggtgttgcaccatcgcagtcgggggagtttcatcaaatgcctgacctttttgatgct
atacatgcttttatggggcagagaggttctgagccgagatttgggcttatggatgctgtt
gataatttcatgaggcatagaatggctggaaggcacccaaactttgatgttagagggagg
tctggtcctgctcctgctcctcctcctgaacagagctggggtgtttacagttctggtcca
tatctaattttccatggtcaagttcctggatttacgttctctaatggcggcccaagaggt
gctccccggcgcgctgagttcggtgactactttatgggtcctggactggaagaacttata
gaacaactcaccctgaatgatcggcgtggtccacccccagctgcgcgatcttcaattgat
gcaatgcctattattaggatcacacaggcacatcttcgctctgactcacactgtccagtt
tgtaaggaaaaatttgaactgggctctgaagctagagagatgccatgcaaccatatttac
cattctgactgcattgttccttggttggttcagcataactcgtgtcctgtttgccgcgtc
gagctgccacctcaaggtcatgttagctctcgtggtggccgaagtttgggaggaaggaac
gtgaacagcagcactgacggcaatgatagctccaggggcagggagaataataaccatcag
aatcaaggaaggagaaatccgctatcatttttgtggccattccgttcttcttcgagttct
tcaaacaataatcgttatgctgagaccagaggaagcagctcttcaaaccctcctgaccag
agtaatggaacaagttatggtggatggccttttgataactaa
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