KEGG   Lotus japonicus: 130733361
Entry
130733361         CDS       T04348                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
lja  Lotus japonicus
Pathway
lja03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130733361
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lja03019]
    130733361
   03041 Spliceosome [BR:lja03041]
    130733361
Messenger RNA biogenesis [BR:lja03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     130733361
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     130733361
Spliceosome [BR:lja03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    130733361
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8
Other DBs
NCBI-GeneID: 130733361
NCBI-ProteinID: XP_057441494
LinkDB
Position
1:7820627..7824961
AA seq 516 aa
MAKKRKQPQRSPAVEPAAKPVDVEPQDQDSVELDHQQPPNPEPTTDLDQSNNTMAVDEEP
EEQDQETEDQPQIDDAVEEEQDPEAPATTESEPQQQQETLEDNADAPNESSAAAAAAAAA
SESVANGSNNNEEEEEEEDLELEEEPVERLLEPFTREQLHSLVKQAAEKYPDFVENVRQL
ADVDPAHRKIFVHGLGWDTTAETLTSVFSKYGEIEDCKAVTDKVTGKSKGYAFILFKHRD
GCRRALKNPQKKIGNRTTSSQLASAGPVPATPPNAPPVSEYTQRKIFVSNVSSDIEPLKL
LEFFKQFGEVEDGPLGLDKNTGRPKGFALFVYRSVESAKKALEEPNKEYEGHTLYCQKAV
DGPKGSKGYHQNQHQHQHQHHSHHHQPHYQPHKKHKYNSGGGPSHGGGGHLMAPSNPGMG
GYNPGVQGQGLNPALGQALALLANQGAGLGLGNLLGTFSGAPVNQAGPPAAAPYGNQAPM
NYGNQPGMQPGYQNPQMGQNSGVRPHPGSGAPYMGH
NT seq 1551 nt   +upstreamnt  +downstreamnt
atggccaagaagcgaaagcaaccgcaacgttcacccgccgtcgaacccgccgccaagccc
gtcgacgtcgaaccccaagaccaagactcggtggaactcgaccaccaacaaccccctaac
cctgaaccaaccactgacctagaccaatccaacaacaccatggccgtcgatgaagaacca
gaagaacaagatcaggaaaccgaagatcagcctcaaatcgacgacgccgtggaagaggaa
caagacccagaagcaccagcaacaacagagtctgaaccacaacaacaacaagaaacccta
gaagataacgctgatgctccaaacgaatcttccgctgccgccgccgccgccgccgccgct
tcggaatcggttgcgaatgggagcaacaacaacgaggaggaagaagaggaagaggatctc
gaattggaggaggaacccgtcgagaggcttctggagccattcacgagggagcagctgcac
tctctggtcaagcaagcggcggagaagtaccctgatttcgtcgagaatgttcgccagctc
gccgatgtggaccccgctcaccggaagatctttgttcatggcctcggctgggacaccacc
gctgaaacgctaaccagcgtcttcagcaagtacggtgagatcgaggattgcaaggcggtt
accgacaaggttactgggaaatcgaagggatatgcattcatcttgttcaagcatagggac
ggttgtcgcagggctctgaagaatcctcagaagaagattgggaaccgaacgacctcgtct
cagttggcatccgctggaccggtgccggcaacgccgccgaatgctcctccggtttctgag
tacacccagaggaagatctttgtgagcaatgtgagctcggatattgaaccattgaagctg
cttgagttcttcaagcagtttggggaggttgaagatggtcccttggggcttgataagaac
accgggaggccgaaggggtttgcgctttttgtttacaggtcggtggagagtgccaagaag
gctttagaagagccaaacaaggaatatgaagggcacactctgtattgtcagaaggctgtg
gatggtcctaaggggagcaaagggtatcatcagaaccagcaccagcaccagcaccaacac
cattctcaccatcatcagcctcactatcagccgcataagaagcacaagtacaactctggt
ggtgggccatcacatggtggtggtggtcacctgatggcgccatcgaatcccggcatggga
ggttataaccctggtgtgcagggtcaggggttgaaccctgctctagggcaggctttagct
ttgcttgctaatcaaggagctgggttggggcttgggaacctgcttggaacttttagtggt
gcaccagtgaaccaggctggaccacctgctgctgctccttatggtaatcaggctcccatg
aactatgggaaccagccagggatgcaaccgggataccagaatcctcagatgggacagaac
agtggtgttagacctcaccctggttctggagctccctatatgggtcattag

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