Lotus japonicus: 130733501 Help Entry 130733501         CDS       T04348                                  Name (RefSeq) E3 ubiquitin-protein ligase COP1   KO K10143   E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27] Organism lja  Lotus japonicus Pathway lja04120   Ubiquitin mediated proteolysis lja04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:lja00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     130733501  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     130733501  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:lja04121]     130733501 Enzymes [BR:lja01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      130733501 Ubiquitin system [BR:lja04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     130733501   Multi subunit type E3    Cul4 complex     Target recognizing subunit (DCAF)      130733501 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 EIF3I Beta-prop_DCAF4 zf-C3HC4_2 WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EML WD40_MABP1-WDR62_1st zf-C3HC4 WD40_like WD40_RFWD3 ANAPC4_WD40 Beta-prop_CAF1B_HIR1 zf-C3HC4_3 zf-RING_UBOX zf-RING_2 Beta-prop_WDR75_1st Beta-prop_WDR35_TULP_N zf-C3HC4_4 Beta-prop_IFT122_1st Beta-prop_DCAF12 zf-RING_5 U-box Beta-prop_IFT122_2nd YbfN DUF1664 Baculo_p24 zf-Nse Motif Other DBs NCBI-GeneID:  130733501 NCBI-ProteinID:  XP_057441699 LinkDB All DBs Position 1:complement(9342410..9354664) Genome browser AA seq 675 aa AA seqDB search MEELSVGPLVPAVRPEPSKSLAVAEAAAAVVAGDAAFPVSMSEPDKDFLCPICMQIIKDA FLTACGHSFCYMCIITHLGNKSDCPCCGHYLTNSNLFPNLLLDKLLKKTSARQISRTATP VEHFRQALQKGCDVTIKELDTLLLLLAEKKRKMEQEEAERNMQILLDFLQCLRKQKVDEL KEVQTDLQFIKEDISSVEKHRLNLYRARDRYSVKLRMLDDSGGRKSWHSSMDKKNSGLLS SPLNLRGGLSSGSHTKRNDGKSLITSHGHGIQRKDAISGSDSQYINQSGLALVRKKRVHT QFNDLQECYLQKRRHAADKPHSQQDRDVNLISREGYSAGLDDFQSVLTTFTRYSRLRVIA ELRHGDIFHSANIVSSIEFDRDDDLFATAGVSRCIKVFDFSAVVNEPTDAHCPVVEMTTR SKLSCLSWNKFAKNQIASSDYEGIVTVWDVTTRKSLMEYEEHEKRAWSVDFSRTDPSMLV SGSDDCKVKIWCTNQEASVLNIDMKANICCVKYNPGCGNFIAVGSADHHIHYYDLRNTSR PVHVFSGHRKAVSYVKFLSNDELASASTDSTLRLWDVKQNLPVRTFRGHTNEKNFVGLTV SSEYIACGSETNEVFVYHKEISKPLTWHRFSSPEMDDAEDEAGSYFISAVCWKSDRPTVL TANSQGTIKVLVLAA NT seq 2028 nt NT seq  +upstreamnt  +downstreamnt atggaagagctctcagtggggccgttagtccccgccgtgagacccgagccatctaaatct ctcgccgtcgcagaagccgccgccgctgtcgtcgccggagacgctgcgtttccggtctcg atgtcggagccggataaggacttcttgtgcccgatttgcatgcagatcatcaaggacgcg ttcctcaccgcctgcggccatagcttctgctacatgtgcatcatcactcacctcgggaac aagagcgattgcccttgctgtggccactacctcaccaacagcaacttgttccctaacttg ttgctcgataagctactgaagaagacatcagctcgtcaaatatcaagaacagcgaccccc gtggagcatttccggcaggcattgcaaaagggttgtgatgtaacaattaaagagctagac acccttttgttactacttgctgagaagaaaagaaaaatggaacaagaagaagctgagaga aatatgcaaatattgttagatttcttgcaatgcttaaggaagcaaaaagttgatgagttg aaggaggttcaaactgatcttcaattcataaaggaggacattagttctgtggagaaacat agactgaacttataccgtgcacgggacaggtactctgtgaaattgcggatgcttgatgat tctggtggaagaaaatcatggcattcatcaatggataagaagaacagtggccttttatct agtccgttaaatcttcgaggagggttgtcttcagggagtcataccaaaagaaatgatgga aagtccctaataacctctcatgggcatggaatccaaagaaaagatgccatcagtggatca gattcacagtatataaatcaatcgggtcttgctctagttaggaaaaaaagggttcataca cagttcaatgacctacaagaatgttatctacaaaaaagacggcatgcagcagataaaccc catagccaacaagatagagatgtaaatcttataagtcgagaaggttatagtgctggtctt gacgattttcagtcagtcttgacaactttcacacgctacagtcgattgagagtcattgcg gaactaaggcatggggatatatttcattcggccaacatagtatcaagcatagagtttgac cgtgatgatgatttgtttgctactgctggggtttcacggtgcattaaagtttttgacttt tctgcggttgtgaatgaacctacagatgctcattgtcctgtagtggagatgactacacgt tcaaaactcagttgcttgagttggaataaatttgctaagaaccaaatagctagtagtgat tatgaaggaattgtgactgtgtgggatgtaaccactcggaagagtttaatggaatatgaa gagcatgaaaaacgtgcttggagtgttgatttttcaagaacagatccctctatgctggtc tctggtagtgatgactgtaaggtcaaaatatggtgtacaaaccaggaggctagtgtcctg aatatagacatgaaagcaaacatatgttgtgtcaagtataatcctggatgtggcaacttc attgcagttgggtcagctgatcatcacatccattattatgatttgagaaatactagccgt ccggtccatgttttcagtgggcacaggaaggctgtgtcatacgtgaaatttttgtctaat gatgaacttgcatctgcatcaacggatagtacactgcgattatgggatgttaagcaaaat ttaccagttcgaactttcagaggccacacaaatgagaaaaactttgttggccttacagta agcagtgaatacattgcatgtggcagtgaaacaaatgaagtatttgtctaccacaaggaa atctccaagcctctgacttggcatagatttagttcccctgagatggatgatgcggaggat gaggctggatcttacttcatcagcgctgtatgctggaagagtgatcgcccaaccgtacta actgcaaatagtcaaggcacaatcaaagttctggtgcttgcagcttga

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