Lotus japonicus: 130733680
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Entry
130733680 CDS
T04348
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 4
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
lja
Lotus japonicus
Pathway
lja03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130733680
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lja01009
]
130733680
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lja03021
]
130733680
03019 Messenger RNA biogenesis [BR:
lja03019
]
130733680
03041 Spliceosome [BR:
lja03041
]
130733680
Enzymes [BR:
lja01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
130733680
Protein phosphatases and associated proteins [BR:
lja01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
130733680
Transcription machinery [BR:
lja03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
130733680
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
130733680
Spliceosome [BR:
lja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130733680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
130733680
NCBI-ProteinID:
XP_057441887
LinkDB
All DBs
Position
1:12453236..12459033
Genome browser
AA seq
317 aa
AA seq
DB search
MSAQGQGQVIEEAVLDDIIRRLTEVRLARPGKQVQLSEAEIKQLCVASRELFIQQPNLLE
LEAPIKICGDIHGQYSDLLRLFEYGGLPPSANYLFLGDYVDRGKQSLETICLLLAYKIKY
PENFFLLRGNHECATINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDDKILCMHG
GLSPELTNLDQIRNLPRSTPIPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSE
FLTKHDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQ
ILKPAVQKTKFVMPNKI
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcacaagggcaagggcaagtgattgaggaggcggtgctggacgacataatccgg
cgactcacggaggtccgtttggcccgaccggggaagcaggttcagctctctgaggcggag
atcaagcagctttgtgtcgcttccagagagctcttcattcagcagcccaatttgctcgaa
cttgaagcacccattaagatttgtggtgacattcatgggcagtacagtgatttgttgagg
ctctttgagtatgggggtttgcctccaagtgctaattatctctttttaggggactatgtg
gatcgtgggaagcagagcttagaaaccatatgtcttttgcttgcttataaaatcaaatat
cctgaaaactttttccttttgagggggaatcatgagtgtgctaccattaacaggatatat
ggattttatgacgaatgtaagcggaggtttaatgtcaggctttggaaagcctttacggac
tgttttaactgccttcctgtggcagcccttatagatgataagatattgtgcatgcatggt
ggtctttcccctgaactcacaaacttggatcaaatcaggaatctaccccgttcaactcct
attccagacactggtttgctttgtgatttgctttggtctgatccgggtagagatgtgaaa
ggttggggtatgaatgacagaggagtctcgtacaccttcggtcccgataaggtgtctgag
tttttgacaaagcatgacttggaccttatttgtcgtgctcatcaggttgttgaggatggg
tatgaattctttgccgacaggcaacttgttacgatattttcagctccaaactactgtggt
gaatttgacaatgctggtgcaatgatgagtgtggatgagaacttgatgtgctctttccag
attcttaagcctgcagtgcaaaaaacaaagttcgtgatgccaaacaagatttga
DBGET
integrated database retrieval system
