Lotus japonicus: 130733809
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Entry
130733809 CDS
T04348
Name
(RefSeq) autophagy protein 5
KO
K08339
autophagy-related protein 5
Organism
lja
Lotus japonicus
Pathway
lja04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
130733809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lja04131
]
130733809
03029 Mitochondrial biogenesis [BR:
lja03029
]
130733809
Membrane trafficking [BR:
lja04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
130733809
Mitochondrial biogenesis [BR:
lja03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
130733809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_HBR
ATG5_UblB
Motif
Other DBs
NCBI-GeneID:
130733809
NCBI-ProteinID:
XP_057442063
LinkDB
All DBs
Position
1:15219207..15232575
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AA seq
349 aa
AA seq
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MSEAQKYVWEGAIPLQIHLHESEVTTLPPPPPALVLAPRIGYLPLLISLLKPHFSSTLPP
GQDTIWFEYKGLPLKWYIPTGVLFDLLCVEPERPWNLTVHFRGYPSNLLLPCEGEDSVKW
SFINSLKEAAYVINGNCKNVMNMSQPDQVELWGSVLNGNLESYRRVSSKLKLGTFEDKHT
ENINSVLPKSESTGDTDAAGQVKSGRIPVRLYVWTVNEEFDDFEDAPQVDDWDKVSYINR
PVEIHNEDGKFFSLNDAVRRLLPEFFQGSSFDSEGDTNINRTTEEGENSGNPGSSFHAHE
IAEIKLVRIQGIEPILEIPFSWVVNNLMNPEYFLHMCVCLKVSEASAVQ
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcgcaaaagtatgtgtgggaaggagccatccctctccagattcacctccat
gaatctgaagtcaccactctccctcctcctccacccgctctcgtcttagcccctcggata
gggtacttgccattgttgatttctctgttgaagcctcacttcagcagtacacttccccct
ggacaagacaccatttggtttgagtacaaagggcttcctctcaagtggtacataccaact
ggtgttcttttcgatcttttatgtgtggagccagaaaggccatggaatctaacagttcac
tttagaggatatccaagtaacttgttgcttccatgtgaaggtgaagacagtgttaagtgg
agctttattaactcactgaaagaggctgcctatgtaataaatggtaattgcaagaatgtc
atgaacatgtctcaacctgatcaggttgagctctggggctctgttttaaatggtaacttg
gaatcttatcgacgggtgtcatctaagcttaagcttggaacttttgaagataaacataca
gaaaacatcaattcagtcttgcctaagtctgaaagtactggggatactgatgctgctgga
caagtgaagagtggtcggatacctgttcgtttatacgtatggactgtcaatgaggagttt
gatgattttgaagatgctcctcaagttgatgattgggacaaagtctcgtatatcaatcga
cctgttgagattcacaatgaagatggtaaattctttagcttaaatgatgcggttagaaga
ctattgcctgagttttttcagggaagttcctttgatagtgaaggagacacaaacatcaac
cgaactacagaagagggagaaaattcaggtaatcctgggtcatctttccacgcacatgag
attgcagaaatcaagcttgttcgcattcaagggatagaaccaattttggagatacctttt
tcttgggtggttaacaacttaatgaaccctgagtattttcttcacatgtgtgtttgcttg
aaagtttcagaagctagtgctgtgcaatag
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integrated database retrieval system
