Lotus japonicus: 130733813
Help
Entry
130733813 CDS
T04348
Name
(RefSeq) phytoene synthase 2, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
lja
Lotus japonicus
Pathway
lja00906
Carotenoid biosynthesis
lja01100
Metabolic pathways
lja01110
Biosynthesis of secondary metabolites
Module
lja_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
130733813
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lja01006
]
130733813
Enzymes [BR:
lja01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
130733813
Prenyltransferases [BR:
lja01006
]
Terpene biosynthesis
Squalene/phytoene synthase
130733813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
130733813
NCBI-ProteinID:
XP_057442070
LinkDB
All DBs
Position
1:15280990..15285282
Genome browser
AA seq
435 aa
AA seq
DB search
MSVTLFWVASFPNLQVSNSTRLLDSIRDVRLFDSSKFMSRDFRSIRAKKDRKKRWRFCSL
STGVKYACVGQSGLESASSFPMISNVLANPAAAEVAVSSEQKVYDVVLKQASLIKRKLSA
GDHGVKQNVFLPGNLSLLSEAYDRCGEICAEYAKTFYLGTLLMTPERRRAIWAIYVWCRR
TDELVDGPNASHITPTALDRWESRLEELFQGRPFDMLDAAVSDTVTKFPVDIQPFKDMIE
GMRTDLRKSRYKNFDELYLYCYYVAGTVGLMSVPIMGISPDSQTSTESVYNAALALGIAN
QLTNILRDVGEDASRGRVYLPQDELAQAGLSEDDIFAGKVTDKWRNFMKSQIKRARMFFD
EAEKGVMELNKASRWPVLASLLLYRQILDEIEANDYNNFTKRAYVSKTKKLLSLPAAYAR
TMVAPPRKLSHVMKA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgacattattttgggttgcctccttccctaacttacaagtatccaattccact
aggttacttgattctattcgagatgtgaggctctttgattcttcgaagttcatgtcgcgg
gattttaggtcaattagagcaaagaaggataggaagaagagatggaggttttgctctttg
agtactggtgtgaagtatgcatgtgttggtcagtctggtttagagagtgctagtagcttc
cctatgatatcgaatgtgctggcgaacccggctgcagcagaagtggctgtttcgtcagaa
cagaaggtctatgatgtggtgctgaagcaggcttctttgattaagaggaagctctccgcc
ggcgatcatggggtgaaacagaatgtttttctgcctgggaatttgagcttgttgagtgaa
gcttatgaccgttgcggagaaatttgtgcagaatatgctaaaacattttacctgggaact
ctcttgatgactccggaaaggcgaagagctatctgggcaatttatgtgtggtgtaggaga
acagatgaacttgttgatggccctaatgcgtcacatattacaccaactgctttggatagg
tgggaatcaagattggaagaacttttccaaggtcgtccatttgatatgcttgatgctgct
gtatcagatacagttaccaaatttcctgttgacatccagccatttaaagatatgatagaa
ggaatgagaacggatcttaggaagtcaagatacaagaactttgatgaactatatctctat
tgttactatgttgctggcacagttggtttaatgagtgttccgatcatgggcatttcaccg
gattcacagacctcaacggagagtgtgtacaacgctgccttggccctaggaattgcaaat
caactaaccaacatccttagagatgttggagaggatgccagcagaggaagagtgtatcta
ccacaagatgagttggctcaggcagggctttcggaagatgacatatttgccggcaaggtg
accgacaagtggaggaacttcatgaagagccaaattaaaagggcaagaatgttttttgat
gaggcagaaaagggagtgatggagcttaataaagctagcagatggccggtattggcgtct
ttgcttttgtatcgccagatattggatgagattgaagctaatgattacaacaatttcact
aagagggcttatgtgagcaaaaccaagaaattactttccttaccagctgcctatgctaga
actatggttgccccaccaagaaagttatctcatgtaatgaaggcatag
DBGET
integrated database retrieval system
