Lotus japonicus: 130733840
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Entry
130733840 CDS
T04348
Name
(RefSeq) sister chromatid cohesion protein SCC4
KO
K11266
MAternally affected uncoordination
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lja03036
]
130733840
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
130733840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cohesin_load
TPR_2
TPR_12
TPR_14
RPN7
Spectrin
FlxA
Adeno_L433K_22K
DUF2203
Motif
Other DBs
NCBI-GeneID:
130733840
NCBI-ProteinID:
XP_057442102
LinkDB
All DBs
Position
1:15876528..15884449
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AA seq
722 aa
AA seq
DB search
MEAVAAGLWTLAEHHENTGEIAKAIKCLEAICQTEVSFPPIVEVKTRLRIATLLLHYSHN
VNHAKAHLERSQLLLKSIPSCFELKCRAFSLLSQCYQLVGAIPPQKQVLHKGLELTASVG
YEISMKLWSCNFNSQLANALSIEGDYRGSLSALECGYACATEVYYPELQMFFATSILHVH
LMQWDDDSLVEQAVNKCNEIWESIEPDKRRQCPGLLFYNELLHIFYRLRLCDYKNAAPHV
DNLDAAMKTSMQQTQQMQELVKELNALDQSLSRSDLYHRDRAALSKKQAMIQEQLRNMTG
LSPIGRESLEPVYFGNARRSIGDKLQLAPPPIDGEWLLKSAVYALVDLIVVIFGRPKGLF
KECGKRIKSGMRIIQDELVKLGITDGVREVDLQHSSIWMAGVYLMLLIQFLENKVAIELT
RAEFVEAQEALIQMRNWFMRFPTILQACECIIEMLRGQYAHAVGCYNEAAFHYIQAVKLT
ESKSMQTMCHVYAAVSYICIGDAESSSQALDLIGPVYGVMDSFVGVREKTGVLFAYGLLL
MKQQDLQESRNRLARGLQLTHTYLGNLQLVSQYLTVLGSLALALQDTAQAREILKSSLTL
AKKLYDIPTQIWVLSVLTGLYKDLGERGNEMENAEYQTRKTIDLQRRIADANASIYHLEI
INKVRFEVDPLHELDAKRAMAGPTMGVSLDIPESIGLSAPLPAPSSSRLVDIDTGKLRKW
RS
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtggcggcgggactctggactctggcggagcaccacgagaacaccggcgaa
atcgccaaagcaatcaaatgcctcgaagccatttgtcaaaccgaagtctcctttccccct
atcgtcgaggtcaagactcgtcttcgcatcgccactctcctcctccactattctcacaac
gtcaaccacgccaaagcacacctcgaacgttcccaattgcttttgaaatcgattccttca
tgctttgaattgaagtgccgagcgttcagtttgctcagccagtgctaccagcttgttggc
gcgattccgccgcagaagcaagtgctgcacaagggtcttgagctcacagcttctgttgga
tacgagatttcaatgaagttatggtcttgcaacttcaattcacagcttgcaaatgctttg
tctattgaaggagactaccgaggttcactctctgccttagagtgtggatatgcctgtgct
actgaagtatactacccggaattgcagatgttttttgccacttcaatactgcatgtccac
ctcatgcaatgggacgatgatagtttggttgagcaggctgttaataaatgcaatgagatt
tgggagtcaattgagccagataaaagaagacaatgccctggcttactcttttacaatgaa
ttgttgcacatattctatcgactgcggctatgtgattacaagaatgctgcaccccatgta
gacaatctggatgctgccatgaagactagtatgcagcaaacacaacaaatgcaagagcta
gtgaaggagctcaatgctttagatcaaagtctctccagatctgacctttaccacagggat
agggcagcactatctaaaaagcaagcaatgattcaagagcagctgagaaacatgactgga
ttgagtccaattggtcgggaatctctggaaccagtatactttgggaatgccagaaggtca
ataggagataagcttcagttagcacctcctcctattgatggtgaatggcttcttaaaagc
gctgtctatgcattagttgatctaatagttgttatatttgggcgcccaaaaggacttttc
aaggagtgtggaaagcgcataaagtctgggatgcgtataattcaagatgagttagtaaag
cttggaattactgatggcgtcagagaagtggacttacaacactcctctatctggatggct
ggagtttacttgatgctactaatacagtttcttgaaaacaaagtggccatagagctcaca
agagcagagtttgttgaagcacaagaggctttgatacagatgagaaattggttcatgcgg
tttccaactatattacaggcatgtgaatgcatcattgagatgcttagaggccaatatgct
catgctgttggctgttataatgaagctgcttttcattatattcaagcagtaaagcttaca
gagagtaaatcaatgcaaactatgtgccatgtttatgcagctgtttcatatatctgcatt
ggtgatgctgaatcttcttcacaggcacttgatttgattgggccagtttatggagtaatg
gattcttttgtgggagttagagaaaaaacaggtgttctttttgcatatggtcttttattg
atgaagcaacaggatctacaagaatcaagaaatcgcctggcaaggggattgcaactgaca
catacttatttggggaaccttcaacttgtttctcaatatctgacagtccttggcagtttg
gcacttgcgctgcaggacacagcacaggcgagggagatattgaaatcatctttgaccttg
gcaaaaaagctttatgatattcctactcagatctgggtgctgtctgttttgacaggttta
tataaagatttaggggaaaggggaaacgaaatggagaatgctgagtaccagacaagaaaa
acgattgatttgcagaggagaatagcagatgcaaatgcttccatctatcatcttgaaata
attaacaaagtaagatttgaagttgacccattgcatgagttggacgccaagcgtgcaatg
gcaggcccaaccatgggagtcagtcttgacatcccagaatctattggtctgtcagcaccc
ttacctgctccatcgtcttcaagactagttgatatagacactggaaaacttagaaaatgg
agatcttag
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