Lotus japonicus: 130734058
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Entry
130734058 CDS
T04348
Name
(RefSeq) tRNA (carboxymethyluridine(34)-5-O)-methyltransferase-like
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
lja
Lotus japonicus
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lja03016
]
130734058
Enzymes [BR:
lja01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
130734058
Transfer RNA biogenesis [BR:
lja03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
130734058
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Gene cluster
GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransf_31
Methyltransf_12
MetW
Ubie_methyltran
Methyltransf_9
Gemini_C4
OYE-like_second_a-b
Motif
Other DBs
NCBI-GeneID:
130734058
NCBI-ProteinID:
XP_057442340
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Position
1:59547820..59554326
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AA seq
378 aa
AA seq
DB search
MVHAHSALKLTSSRFFYNPRGVLGLLTAIGGCVCHSGFCSMTQINSEVGSSLCSILAPNG
EPCITDSSSVVENPTTSSVSVRSTPEIEKKFVHHVYDAIAPHFSSTRFAKWPKVASFLSS
LPSGSLVLDAGCGNGKYLGLNQDCFFIGCDISPSLIKICSDRGHEVMVADAVNLPYRTGF
GDAAISIAVLHHLSTENRRRKAIEELVRVVKKGGLVLITVWAVEQEDKLLVTKWTPLAEK
NLEEWPEPGNHCARVPSFSSLESIPESEESSSVEHVKVCNESKSSSDLNEEKKLKNQQEY
FVPWHLPYHRAEISGSSADALATGLATKDDKKGAVVYNRYYHVFSQGELESLANGINNAR
VVDQFFDKSNWCIILEKT
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggttcatgctcatagtgctctaaaactaacatcaagtagattcttctacaaccctagg
ggagttctcggtttactcactgctattggtggttgtgtctgtcattcaggattttgttca
atgacacaaatcaattctgaagtgggttctagtttatgtagtattcttgccccaaatggg
gaaccctgcatcacagattcctcatcagtagttgagaaccctaccacttcgtcggtgagc
gtgcggtctacccctgaaattgaaaagaagtttgttcatcatgtttatgatgctattgcg
ccgcatttcagttccactcggtttgccaagtggccaaaggttgcctcttttttgtcatct
ttgccttcaggatctcttgtcctggatgcgggatgcgggaatgggaagtacttgggttta
aatcaagattgtttttttattggatgtgatataagtccttcgttgattaaaatatgctca
gatagaggacatgaagttatggttgcagatgcagtgaatcttccttacagaactggtttt
ggtgatgcggcaatatctatagctgtgttacatcatttgagcactgagaatcgaaggaga
aaagcaatagaagagttagtccgagttgttaaaaagggtggccttgttcttattacagtt
tgggctgtagaacaagaggataaattgctggtcaccaaatggactccgcttgcagaaaaa
aatcttgaagagtggccagaacctggaaatcattgtgctcgggttccttcattttcatca
ttggaaagtattccagaaagtgaggagagtagctcggttgagcacgttaaagtttgcaat
gagtcaaaatcatcaagtgatttgaatgaagaaaaaaaattgaagaatcaacaggagtat
tttgttccttggcatttaccttatcatcgtgcagaaatcagtggttcttctgcagatgct
cttgctactggtcttgcaactaaagatgacaaaaagggggctgtagtgtacaatagatat
tatcatgtttttagtcaaggcgagcttgaaagtttggcaaatggaataaacaatgcaaga
gttgttgatcagttttttgataaatccaactggtgtattattctagagaagacatga
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